RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 CMTM7Q96FZ5 175 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 VMP1Q96GC9 406 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 GPR137Q96N19 417 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ALOXE3Q9BYJ1 711 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ROGDIQ9GZN7 287 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ADAP2Q9NPF8 381 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ZNF358Q9NW07 568 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 ADGRE2Q9UHX3 823 aa11.53□□□□□ -0.56
CLDN12-213ENST00000496677 MRPS33Q9Y291 106 aaKnown RBP11.53□□□□□ -0.56
CLDN12-213ENST00000496677 MYOCOSA0A1B0GUC4 107 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 SYNDIG1LA6NDD5 238 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 H0YIV9 168 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 UGDHO60701 494 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 PCNAP12004 261 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 TYK2P29597 1187 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 CA7P43166 264 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 SERPINB8P50452 374 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 ARFIP1P53367 373 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 PER3P56645 1201 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 IGLV3-21P80748 117 aaPredicted RBP11.52□□□□□ -0.57
CLDN12-213ENST00000496677 RCN2Q14257 317 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 GLE1Q53GS7 698 aaKnown RBP11.52□□□□□ -0.57
CLDN12-213ENST00000496677 TECRLQ5HYJ1 363 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 METTL2BQ6P1Q9 378 aaKnown RBP11.52□□□□□ -0.57
CLDN12-213ENST00000496677 Q6ZPB1 254 aaPredicted RBP11.52□□□□□ -0.57
CLDN12-213ENST00000496677 CLNKQ7Z7G1 428 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 TMEM132CQ8N3T6 1108 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 L3MBTL4Q8NA19 623 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 TMEM178AQ8NBL3 297 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 MORN4Q8NDC4 146 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 HUS1BQ8NHY5 278 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 DCAKDQ8WVC6 231 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 SORBS1Q9BX66 1292 aaKnown RBP11.52□□□□□ -0.57
CLDN12-213ENST00000496677 ZNF717Q9BY31 904 aaPredicted RBP11.52□□□□□ -0.57
CLDN12-213ENST00000496677 TSPYL1Q9H0U9 437 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 OR51B5Q9H339 312 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 COPS7BQ9H9Q2 264 aaPredicted RBP11.52□□□□□ -0.57
CLDN12-213ENST00000496677 DMRT3Q9NQL9 472 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 PSD3Q9NYI0 1048 aa11.52□□□□□ -0.57
CLDN12-213ENST00000496677 MTRF1LQ9UGC7 380 aaKnown RBP11.52□□□□□ -0.57
CLDN12-213ENST00000496677 NPIPA5E9PKD4 350 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 SAP18O00422 153 aaKnown RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 PLPP1O14494 284 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 FCHO1O14526 889 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 OR7A17O14581 309 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ASNA1O43681 348 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 LDB3O75112 727 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 SH3BGRLO75368 114 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ITGA10O75578 1167 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ZFAND5O76080 213 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 SIX3O95343 332 aaPredicted RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ACSL3O95573 720 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ALDH6A1Q02252 535 aaKnown RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 SLAMF1Q13291 335 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 GTF2H2Q13888 395 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 SERTAD2Q14140 314 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 UAP1Q16222 522 aaPredicted RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 MAPKAPK3Q16644 382 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 AP5B1Q2VPB7 878 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 OR4C11Q6IEV9 310 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 MRM1Q6IN84 353 aaKnown RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 GTF2H2CQ6P1K8 395 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 C16orf47Q6ZP98 133 aaPredicted RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 CEP128Q6ZU80 1094 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 MDGA2Q7Z553 956 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 GOLGA7Q7Z5G4 137 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 FGD2Q7Z6J4 655 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ZCCHC7Q8N3Z6 543 aaKnown RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 TMEM151AQ8N4L1 468 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 CPSF7Q8N684 471 aaKnown RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 MNS1Q8NEH6 495 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 WDR20Q8TBZ3 569 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ITLN2Q8WWU7 325 aaPredicted RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 IFT81Q8WYA0 676 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 RGMAQ96B86 450 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 IPPKQ9H8X2 491 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 NPIPA1Q9UND3 350 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 YARS2Q9Y2Z4 477 aaKnown RBP11.51□□□□□ -0.57
CLDN12-213ENST00000496677 ASB4Q9Y574 426 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 PCDHGA11Q9Y5H2 935 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 CACNA1DQ01668 2161 aa11.51□□□□□ -0.57
CLDN12-213ENST00000496677 TRGV8A0A0C4DH27 118 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 FOXE1O00358 373 aaPredicted RBP11.5□□□□□ -0.57
CLDN12-213ENST00000496677 SLC19A2O60779 497 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 ETHE1O95571 254 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 TUBB4AP04350 444 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 SBK3P0C264 359 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 COL6A2P12110 1019 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 GFAPP14136 432 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 PTX3P26022 381 aaPredicted RBP11.5□□□□□ -0.57
CLDN12-213ENST00000496677 BSGP35613 385 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 SERPINB9P50453 376 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 RPS13P62277 151 aaKnown RBP11.5□□□□□ -0.57
CLDN12-213ENST00000496677 CUL3Q13618 768 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 C3AR1Q16581 482 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 KLC3Q6P597 504 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 SPPL2CQ8IUH8 684 aa11.5□□□□□ -0.57
CLDN12-213ENST00000496677 SULF2Q8IWU5 870 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms