RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 CCM2Q9BSQ5 444 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 ABCC13Q9NSE7 274 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 SLCO1C1Q9NYB5 712 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 ACTR10Q9NZ32 417 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 CD274Q9NZQ7 290 aa8.69□□□□□ -1.02
HPS4-217ENST00000496385 CXXC1Q9P0U4 656 aaPredicted RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 GPN3Q9UHW5 284 aaPredicted RBP8.69□□□□□ -1.02
HPS4-217ENST00000496385 CHD9Q3L8U1 2897 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 LINC01387J3KSC0 135 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 B4GALT5O43286 388 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 SELENOFO60613 162 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 PSIP1O75475 530 aaKnown RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 CCNB2O95067 398 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 KDELR2P33947 212 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 CD96P40200 585 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 IDH2P48735 452 aaKnown RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 AKR1D1P51857 326 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 NUDT6P53370 316 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 FGL1Q08830 312 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 CYP27C1Q4G0S4 372 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 FBXO47Q5MNV8 452 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 SLC27A4Q6P1M0 643 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 MZT2AQ6P582 158 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 HS6ST3Q8IZP7 471 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 NKAPQ8N5F7 415 aaKnown RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 BVESQ8NE79 360 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 OR11H7Q8NGC8 314 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 ZNF419Q96HQ0 510 aaPredicted RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 C10orf90Q96M02 699 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 UROC1Q96N76 676 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 FN3KQ9H479 309 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 FZD3Q9NPG1 666 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 ZNF275Q9NSD4 429 aaPredicted RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 TXNL4BQ9NX01 149 aaKnown RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 HCN3Q9P1Z3 774 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 PADI3Q9ULW8 664 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 DTX4Q9Y2E6 619 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 PADI2Q9Y2J8 665 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 POLR3HQ9Y535 204 aaPredicted RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 NPTNQ9Y639 398 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 MYLKQ15746 1914 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 LOC102723532A0A0G2JNH3 316 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 SLC19A2O60779 497 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 SCN2BO60939 215 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 MT-CYBP00156 380 aaPredicted RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 GLUD1P00367 558 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 STAG3L1P0CL83 205 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 OGNP20774 298 aaKnown RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 PRDX3P30048 256 aaKnown RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 RPL35P42766 123 aaKnown RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 CENPAP49450 140 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 STK19P49842 368 aaPredicted RBP8.68□□□□□ -1.02
HPS4-217ENST00000496385 OSTNP61366 133 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 MAP4K2Q12851 820 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 VEZF1Q14119 521 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 GTDC1Q4AE62 458 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 ARHGAP15Q53QZ3 475 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 MRNIPQ6NTE8 343 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 C3P1Q6ZMU1 363 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 FGD2Q7Z6J4 655 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 MIB1Q86YT6 1006 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 CRYBG2Q8N1P7 616 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 LIX1Q8N485 282 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 OR52E6Q96RD3 313 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 MYOCQ99972 504 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 H2AFJQ9BTM1 129 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 RBCK1Q9BYM8 510 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 OR51J1Q9H342 316 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 GPRC5BQ9NZH0 403 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 TINAGQ9UJW2 476 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 FBXW11Q9UKB1 542 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 POMT2Q9UKY4 750 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 ST3GAL5Q9UNP4 418 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 NUBP2Q9Y5Y2 271 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 SHROOM3Q8TF72 1996 aa8.68□□□□□ -1.02
HPS4-217ENST00000496385 A0A1B0GW55 424 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 ISM1B1AKI9 464 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SLC28A1O00337 649 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 STK25O00506 426 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 MATN3O15232 486 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 RGS14O43566 566 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 ECI2O75521 394 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 AP2A2O94973 939 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DUX4L2P0CJ85 424 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DUX4L3P0CJ86 424 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DUX4L4P0CJ87 422 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DUX4L5P0CJ88 424 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DUX4L6P0CJ89 424 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DUX4L7P0CJ90 424 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 HOXB9P17482 250 aaPredicted RBP8.67□□□□□ -1.02
HPS4-217ENST00000496385 GSTM5P46439 218 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 TIAL1Q01085 375 aaKnown RBP eCLIP8.67□□□□□ -1.02
HPS4-217ENST00000496385 DHODHQ02127 395 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 DSG2Q14126 1118 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SHHQ15465 462 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 VMACQ2NL98 169 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 SPIN4Q56A73 249 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 FAM26DQ5JW98 314 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 CDKL4Q5MAI5 379 aa8.67□□□□□ -1.02
HPS4-217ENST00000496385 PDSS1Q5T2R2 415 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms