RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SLC35C1Q96A29 364 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 BPIFA2Q96DR5 249 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 NSMCE2Q96MF7 247 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 LITAFQ99732 161 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 TEX13AQ9BXU3 409 aaPredicted RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 DPEP3Q9H4B8 488 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 FNDC4Q9H6D8 234 aaPredicted RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 RPF1Q9H9Y2 349 aaKnown RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 FAM212BQ9NTI7 297 aaPredicted RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 KCNN3Q9UGI6 736 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 SLC12A6Q9UHW9 1150 aa3.2□□□□□ -1.9
CLK1-214ENST00000496205 FOXA2Q9Y261 457 aaPredicted RBP3.2□□□□□ -1.9
CLK1-214ENST00000496205 FAM205AQ6ZU69 1335 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ARID2Q68CP9 1835 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SLC15A5A6NIM6 579 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 KPNA7A9QM74 516 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 LMO7DNF2Z398 122 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 G3V2L1 256 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 M0R296 226 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 UBXN8O00124 270 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 CHUKO15111 745 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 PSMD3O43242 534 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 RIPK2O43353 540 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 TLX2O43763 284 aaPredicted RBP3.19□□□□□ -1.9
CLK1-214ENST00000496205 HSF2BPO75031 334 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ZFAND5O76080 213 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 MT-ATP6P00846 226 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 KRT8P05787 483 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 HMBSP08397 361 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 KRT3P12035 628 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SKILP12757 684 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SFNP31947 248 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 OR3A3P47888 321 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ARFIP1P53367 373 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 PAX9P55771 341 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 GUCY2DQ02846 1103 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SLC34A1Q06495 639 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SLC3A1Q07837 685 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 MRPL28Q13084 256 aaKnown RBP3.19□□□□□ -1.9
CLK1-214ENST00000496205 ITGA9Q13797 1035 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 MAPK11Q15759 364 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ZNF876PQ49A33 203 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 FASTKD1Q53R41 847 aaKnown RBP3.19□□□□□ -1.9
CLK1-214ENST00000496205 SPANXN4Q5MJ08 99 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 PRAMEF7Q5VXH5 474 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SLC27A4Q6P1M0 643 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ZCCHC12Q6PEW1 402 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 AFTPHQ6ULP2 937 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 C15orf52Q6ZUT6 534 aaKnown RBP3.19□□□□□ -1.9
CLK1-214ENST00000496205 SYVN1Q86TM6 617 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 HOGA1Q86XE5 327 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 WDR49Q8IV35 697 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 STHQ8IWL8 128 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 DND1Q8IYX4 353 aaKnown RBP3.19□□□□□ -1.9
CLK1-214ENST00000496205 NEK11Q8NG66 645 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 OR10G8Q8NGN5 311 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 OR4A16Q8NH70 328 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 FAM76AQ8TAV0 307 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 GPR148Q8TDV2 347 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ZNRF4Q8WWF5 429 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SLC5A11Q8WWX8 675 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 HAS2Q92819 552 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ZNF560Q96MR9 790 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SSX3Q99909 188 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ZNF577Q9BSK1 485 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 FUCA2Q9BTY2 467 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 TDRD1Q9BXT4 1180 aaKnown RBP3.19□□□□□ -1.9
CLK1-214ENST00000496205 TRIM6Q9C030 488 aaPredicted RBP3.19□□□□□ -1.9
CLK1-214ENST00000496205 TSPYL1Q9H0U9 437 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ATG10Q9H0Y0 220 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ZNF665Q9H7R5 613 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ATAD3AQ9NVI7 634 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 C2orf42Q9NWW7 574 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 MIS18AQ9NYP9 233 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 SPASTQ9UBP0 616 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 POLKQ9UBT6 870 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 LAMP5Q9UJQ1 280 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 ETV7Q9Y603 341 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 U3KQV3 271 aa3.19□□□□□ -1.9
CLK1-214ENST00000496205 A0A1B0GWJ7 208 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 CFAP73A6NFT4 308 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 HHLA1C9JL84 531 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 NPIPB9F8W1W9 429 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 FAM72CH0Y354 149 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 AP3B1O00203 1094 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 SIGLEC5O15389 551 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 P2RX6O15547 441 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 KRT6BP04259 564 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 TPBGLP0DKB5 382 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 HSPA5P11021 654 aaKnown RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 CEBPBP17676 345 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 ACP1P24666 158 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 DNAJB1P25685 340 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 KRT6CP48668 564 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 SULT1E1P49888 294 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 BACE1P56817 501 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 CEACAM7Q14002 265 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 GRB14Q14449 540 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 EFTUD2Q15029 972 aaKnown RBP eCLIP3.18□□□□□ -1.9
CLK1-214ENST00000496205 TEAD2Q15562 447 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms