RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	IFNA16	P05015	189 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ALPP	P05187	535 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ENO1	P06733	434 aa	Known RBP	9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	KLK1	P06870	262 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	MYZAP	P0CAP1	466 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	PRR35	P0CG20	571 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ITGAM	P11215	1152 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	PPP2R1B	P30154	601 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	FOXA1	P55317	472 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	HNRNPH2	P55795	449 aa	Known RBP	9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	BTK	Q06187	659 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ASPH	Q12797	758 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	STX4	Q12846	297 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	CASP8	Q14790	479 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	BTBD16	Q32M84	506 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	VWA5B1	Q5TIE3	1220 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	C18orf63	Q68DL7	685 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	LINC00696	Q6ZRV3	163 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	PRICKLE2	Q7Z3G6	844 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	CROCCP2	Q86T23	111 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	GPR180	Q86V85	440 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	NUDT13	Q86X67	352 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	OR4N5	Q8IXE1	308 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ZNF595	Q8IYB9	648 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	SIRT6	Q8N6T7	355 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	TEX19	Q8NA77	164 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	PPP1R14C	Q8TAE6	165 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	BRIX1	Q8TDN6	353 aa	Known RBP	9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ADAMTS18	Q8TE60	1221 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	PKNOX2	Q96KN3	472 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	IMMP1L	Q96LU5	166 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	LPAR4	Q99677	370 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	WDR77	Q9BQA1	342 aa	Predicted RBP	9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ZNF717	Q9BY31	904 aa	Predicted RBP	9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	LHPP	Q9H008	270 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ZNF552	Q9H707	407 aa	Predicted RBP	9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ZBTB20	Q9HC78	741 aa	Predicted RBP	9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	TNFRSF12A	Q9NP84	129 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	PSD3	Q9NYI0	1048 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	AHSP	Q9NZD4	102 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	PTGFRN	Q9P2B2	879 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	ZNF451	Q9Y4E5	1061 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	MMACHC	Q9Y4U1	282 aa		9.22	□□□□□ -0.93
CALD1-223	ENST00000496024	HEMK1	Q9Y5R4	338 aa	Predicted RBP	9.22	□□□□□ -0.93
CALD1-223	ENST00000496024		A0A0A6YYD5	115 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	TCRBV16S1A1N1	A0A5B0	115 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	GOLGA6L10	A6NI86	522 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	WASHC1	A8K0Z3	465 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024		A8MUI8	341 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	CTNS	O60931	367 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	MYO1D	O94832	1006 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	SEMA3D	O95025	777 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	SCEL	O95171	688 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	SERPINA7	P05543	415 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	BPGM	P07738	259 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	CYC1	P08574	325 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	FAM58BP	P0C7Q3	252 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	TSFM	P43897	325 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	ST13	P50502	369 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	HSD17B7	P56937	341 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	SOX8	P57073	446 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	HMGCS1	Q01581	520 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	C19orf57	Q0VDD7	668 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	IMPG1	Q17R60	797 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	SPDYA	Q5MJ70	313 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	CCNYL2	Q5T2Q4	361 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	C10orf62	Q5T681	223 aa	Predicted RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	AGAP7P	Q5VUJ5	663 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	B3GNTL1	Q67FW5	361 aa	Predicted RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	FCRLB	Q6BAA4	426 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	CLEC6A	Q6EIG7	209 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	PAGE2	Q7Z2X7	111 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	COMMD6	Q7Z4G1	85 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	NUDCD3	Q8IVD9	361 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	METTL4	Q8N3J2	472 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	ZCCHC7	Q8N3Z6	543 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	C1orf52	Q8N6N3	182 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	ANKRD42	Q8N9B4	389 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	AGR3	Q8TD06	166 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	SREK1	Q8WXA9	508 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	AGAP4	Q96P64	663 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	SMAD5	Q99717	465 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	PAIP2	Q9BPZ3	127 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	ALOXE3	Q9BYJ1	711 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	ACPT	Q9BZG2	426 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	RPF2	Q9H7B2	306 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	DDX31	Q9H8H2	851 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	BRF2	Q9HAW0	419 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	KCNK13	Q9HB14	408 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	MLXIPL	Q9NP71	852 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	NMRK1	Q9NWW6	199 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	LYAR	Q9NX58	379 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	LUZP4	Q9P127	313 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	VPS29	Q9UBQ0	182 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	PHF11	Q9UIL8	331 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	PPT2	Q9UMR5	302 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	ATG4B	Q9Y4P1	393 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	ASB4	Q9Y574	426 aa		9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	FASN	P49327	2511 aa	Known RBP	9.21	□□□□□ -0.94
CALD1-223	ENST00000496024	IGKV3D-11	A0A0A0MRZ8	115 aa		9.2	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms