RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 BIKQ13323 160 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 UBAP2LQ14157 1087 aaKnown RBP16.5■□□□□ 0.23
HDAC4-211ENST00000494800 NR6A1Q15406 480 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 GGTA1PQ4G0N0 100 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 FHL5Q5TD97 284 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 CYP20A1Q6UW02 462 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 GPR180Q86V85 440 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 NUDT13Q86X67 352 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 TMEM52Q8NDY8 209 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 WDR20Q8TBZ3 569 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 GRHL3Q8TE85 626 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 ZNF483Q8TF39 744 aaPredicted RBP16.5■□□□□ 0.23
HDAC4-211ENST00000494800 VMP1Q96GC9 406 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 NSUN5Q96P11 429 aaKnown RBP16.5■□□□□ 0.23
HDAC4-211ENST00000494800 C1QTNF3Q9BXJ4 246 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 ERVK-6Q9BXR3 956 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 ALOXE3Q9BYJ1 711 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 CDCP1Q9H5V8 836 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 WDR41Q9HAD4 459 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 LYARQ9NX58 379 aaKnown RBP16.5■□□□□ 0.23
HDAC4-211ENST00000494800 KCMF1Q9P0J7 381 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 SNX6Q9UNH7 406 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 STK38LQ9Y2H1 464 aa16.5■□□□□ 0.23
HDAC4-211ENST00000494800 SPENQ96T58 3664 aaKnown RBP16.5■□□□□ 0.23
HDAC4-211ENST00000494800 GABRR3A8MPY1 467 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 DYRK3O43781 588 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 GLRA3O75311 464 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 SUPT7LO94864 414 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 SEMA3DO95025 777 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 RASAL1O95294 804 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 CRYABP02511 175 aaKnown RBP16.49■□□□□ 0.23
HDAC4-211ENST00000494800 COX7A2P14406 83 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 CD46P15529 392 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 TNNI3P19429 210 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 ATP5F1P24539 256 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-211ENST00000494800 CCT5P48643 541 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 NEK2P51955 445 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 TRAF3Q13114 568 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 TUBA3CQ13748 450 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 TUBA3EQ6PEY2 450 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 TDRPQ86YL5 185 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 RNF175Q8N4F7 328 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 KIF2BQ8N4N8 673 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 NFAM1Q8NET5 270 aaPredicted RBP16.49■□□□□ 0.23
HDAC4-211ENST00000494800 MYRIPQ8NFW9 859 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 OR4F6Q8NGB9 312 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 OR14A16Q8NHC5 309 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 FAR1Q8WVX9 515 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 MTFMTQ96DP5 389 aaKnown RBP16.49■□□□□ 0.23
HDAC4-211ENST00000494800 CCDC126Q96EE4 140 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 C5orf34Q96MH7 638 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 BARD1Q99728 777 aaKnown RBP16.49■□□□□ 0.23
HDAC4-211ENST00000494800 ZBTB26Q9HCK0 441 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 OLAHQ9NV23 265 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 NMRK1Q9NWW6 199 aa16.49■□□□□ 0.23
HDAC4-211ENST00000494800 DOCK10Q96BY6 2186 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 MYO18BQ8IUG5 2567 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 TRBV11-1A0A0K0K1C0 115 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 ARHGAP10A1A4S6 786 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 ANKUB1A6NFN9 424 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 ZNF500O60304 480 aaPredicted RBP16.48■□□□□ 0.23
HDAC4-211ENST00000494800 CDH16O75309 829 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 SLU7O95391 586 aaKnown RBP16.48■□□□□ 0.23
HDAC4-211ENST00000494800 SHBGP04278 402 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 SBK3P0C264 359 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 EDN3P14138 238 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 SLCO1A2P46721 670 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 TNFRSF17Q02223 184 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 CLCQ05315 142 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 ZNF766Q5HY98 468 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 PAGE2Q7Z2X7 111 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 TMEM151AQ8N4L1 468 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 AMER2Q8N7J2 671 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 TMEM178AQ8NBL3 297 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 MORN4Q8NDC4 146 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 ST6GALNAC3Q8NDV1 305 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 TANKQ92844 425 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 SORBS1Q9BX66 1292 aaKnown RBP16.48■□□□□ 0.23
HDAC4-211ENST00000494800 RPF2Q9H7B2 306 aaKnown RBP16.48■□□□□ 0.23
HDAC4-211ENST00000494800 DDX31Q9H8H2 851 aaKnown RBP16.48■□□□□ 0.23
HDAC4-211ENST00000494800 ANKZF1Q9H8Y5 726 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 VTI1BQ9UEU0 232 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 TRPS1Q9UHF7 1281 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 PPIEQ9UNP9 301 aaKnown RBP16.48■□□□□ 0.23
HDAC4-211ENST00000494800 NTNG1Q9Y2I2 539 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 PCDHGB6Q9Y5F9 930 aa16.48■□□□□ 0.23
HDAC4-211ENST00000494800 CCDC151A5D8V7 595 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 SMIM23A6NLE4 172 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 LDB3O75112 727 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 AGFG2O95081 481 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 CBX6O95503 412 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 MLYCDO95822 493 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 FAM58BPP0C7Q3 252 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 IMPDH1P20839 514 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 CD96P40200 585 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 CYB561P49447 251 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 CDH13P55290 713 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 MRPL49Q13405 166 aaKnown RBP16.47■□□□□ 0.23
HDAC4-211ENST00000494800 RASA2Q15283 850 aa16.47■□□□□ 0.23
HDAC4-211ENST00000494800 OR1C1Q15619 314 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms