RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MEOX1P50221 254 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 GPR85P60893 370 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 CKAP4Q07065 602 aaKnown RBP8.94□□□□□ -0.98
MSH5-218ENST00000494646 TGM3Q08188 693 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 SLAMF1Q13291 335 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 TBCCQ15814 346 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 PFKFB4Q16877 469 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 AP5B1Q2VPB7 878 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 OR4C11Q6IEV9 310 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 MED27Q6P2C8 311 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 IL20RBQ6UXL0 311 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 CHSY3Q70JA7 882 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 LRRC70Q7Z2Q7 622 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 ZNF572Q7Z3I7 529 aaPredicted RBP8.94□□□□□ -0.98
MSH5-218ENST00000494646 MDGA2Q7Z553 956 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 MYLK4Q86YV6 388 aaPredicted RBP8.94□□□□□ -0.98
MSH5-218ENST00000494646 SPPL2CQ8IUH8 684 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 LAS2Q8IYD9 372 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 CENPLQ8N0S6 344 aaPredicted RBP8.94□□□□□ -0.98
MSH5-218ENST00000494646 LGI4Q8N135 537 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 TMEM132CQ8N3T6 1108 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 ACOT4Q8N9L9 421 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 OR7G3Q8NG95 312 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 IFT81Q8WYA0 676 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 TMEM125Q96AQ2 219 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 MTFMTQ96DP5 389 aaKnown RBP8.94□□□□□ -0.98
MSH5-218ENST00000494646 VMP1Q96GC9 406 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 SEC16BQ96JE7 1060 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 FRMD6Q96NE9 622 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 KCNC2Q96PR1 638 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 TBCDQ9BTW9 1192 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 MS4A8Q9BY19 250 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 PHACTR1Q9C0D0 580 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 OR8D2Q9GZM6 311 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 VPS11Q9H270 941 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 SNX15Q9NRS6 342 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 ZDHHC18Q9NUE0 388 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 ZNF358Q9NW07 568 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 NINJ2Q9NZG7 142 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 SUCOQ9UBS9 1254 aaKnown RBP8.94□□□□□ -0.98
MSH5-218ENST00000494646 DMGDHQ9UI17 866 aaKnown RBP8.94□□□□□ -0.98
MSH5-218ENST00000494646 ANGPTL3Q9Y5C1 460 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 CLCA3PQ9Y6N3 262 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 CREBBPQ92793 2442 aa8.94□□□□□ -0.98
MSH5-218ENST00000494646 APCP25054 2843 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 TACC2O95359 2948 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 A0A087X1B8 175 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 TMEM200CA6NKL6 621 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 WASHC1A8K0Z3 465 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 PEX1O43933 1283 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 HS6ST1O60243 411 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 PDE9AO76083 593 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 KLHL2O95198 593 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 MLYCDO95822 493 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 SNRPB2P08579 225 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 ZNF16P17020 682 aaPredicted RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 HIST1H1TP22492 207 aaPredicted RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 CPN2P22792 545 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 PIK3CGP48736 1102 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 CASP6P55212 293 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 RPS13P62277 151 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 NAB1Q13506 487 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 RCN2Q14257 317 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 FAM83EQ2M2I3 478 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 ZNF750Q32MQ0 723 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 DEPDC1Q5TB30 811 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 C3P1Q6ZMU1 363 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 NCCRP1Q6ZVX7 275 aaPredicted RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 LURAP1LQ8IV03 231 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 SIAH3Q8IW03 269 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 SRRM1Q8IYB3 904 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 CYP4Z2PQ8N1L4 340 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 PLD6Q8N2A8 252 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 SRFBP1Q8NEF9 429 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 HUS1BQ8NHY5 278 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 UHMK1Q8TAS1 419 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 ADAMTS18Q8TE60 1221 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 PTPMT1Q8WUK0 201 aaPredicted RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 ITLN2Q8WWU7 325 aaPredicted RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 UBE2E3Q969T4 207 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 PPWD1Q96BP3 646 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 CMTM7Q96FZ5 175 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 MAGED4Q96JG8 741 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 MTERF1Q99551 399 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 TRIM45Q9H8W5 580 aaPredicted RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 ADAP2Q9NPF8 381 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 CPSF2Q9P2I0 782 aaKnown RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 VTI1BQ9UEU0 232 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 ERVK-11Q9UQG0 969 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 RNF11Q9Y3C5 154 aa8.93□□□□□ -0.98
MSH5-218ENST00000494646 NCOA6Q14686 2063 aaPredicted RBP8.93□□□□□ -0.98
MSH5-218ENST00000494646 PKDREJQ9NTG1 2253 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 SYCE1LA8MT33 242 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 C17orf105B2RV13 164 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 POC1B-GALNT4F8VUJ3 575 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 G3V3Y1 287 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 KLRC4-KLRK1H3BQV0 150 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 CDK2AP1O14519 115 aa8.92□□□□□ -0.98
MSH5-218ENST00000494646 CDC40O60508 579 aaKnown RBP eCLIP8.92□□□□□ -0.98
MSH5-218ENST00000494646 PRKRAO75569 313 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms