RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RNF123Q5XPI4 1314 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 MYO5CQ9NQX4 1742 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 TRAPPC8Q9Y2L5 1435 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 A0A0U1RQG5 324 aaPredicted RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 MEX3AA1L020 520 aaKnown RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 A8MU76 341 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 G3V2L1 256 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 ARHGEF9O43307 516 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 SYT7O43581 403 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 CLN5O75503 358 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 GPR183P32249 361 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 HSPA1LP34931 641 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 ATP6V1E1P36543 226 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 CLCN4P51793 760 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 BACE1P56817 501 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 ERVK11-1P61568 191 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 CYCSP99999 105 aaKnown RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 SPHARQ15513 63 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 MOGAT2Q3SYC2 334 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 FRRS1Q6ZNA5 592 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 LRRTM1Q86UE6 522 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 MYPOPQ86VE0 399 aaPredicted RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 METTL4Q8N3J2 472 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 TMEM99Q8N816 258 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 TRPV3Q8NET8 790 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 PRCCQ92733 491 aaPredicted RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 HAS2Q92819 552 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 BCL2L2Q92843 193 aaPredicted RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 CXorf58Q96LI9 332 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 LINC00479Q96M42 142 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 AGAP4Q96P64 663 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 KRT12Q99456 494 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 OPRPNQ99935 248 aaPredicted RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 MRPL9Q9BYD2 267 aaKnown RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 MTHFD2LQ9H903 347 aaPredicted RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 KCNK13Q9HB14 408 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 GPN1Q9HCN4 374 aaPredicted RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 ZCCHC3Q9NUD5 404 aaKnown RBP3.73□□□□□ -1.81
SMC4-224ENST00000494612 NDUFA13Q9P0J0 144 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 ZNF319Q9P2F9 582 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 KLK11Q9UBX7 282 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 EXOC7Q9UPT5 735 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 OR1A2Q9Y585 309 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 ZNF518AQ6AHZ1 1483 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 PRXQ9BXM0 1461 aa3.73□□□□□ -1.81
SMC4-224ENST00000494612 PLCH2O75038 1416 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 A0A1B0GU03 582 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 SRRM4A7MD48 611 aaKnown RBP3.72□□□□□ -1.81
SMC4-224ENST00000494612 P2RX6O15547 441 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 ZNF749O43361 778 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 VEGFDO43915 354 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 TOM1O60784 492 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 SORBS2O94875 1100 aaKnown RBP3.72□□□□□ -1.81
SMC4-224ENST00000494612 VDRP11473 427 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 DPEP1P16444 411 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 UGT1A6P19224 532 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 ID1P41134 155 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 CASP3P42574 277 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 PEX3P56589 373 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 CBX3Q13185 183 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 GPR50Q13585 617 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 GIT2Q14161 759 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 FUT11Q495W5 492 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 SLC10A5Q5PT55 438 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 SNRNP48Q6IEG0 339 aaKnown RBP3.72□□□□□ -1.81
SMC4-224ENST00000494612 LCLAT1Q6UWP7 414 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 CNTN4Q8IWV2 1026 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 PEX5LQ8IYB4 626 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 ELMOD1Q8N336 334 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 ZNF485Q8NCK3 441 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 CCDC197Q8NCU1 140 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 UBTD2Q8WUN7 234 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 ZNF599Q96NL3 588 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 FGFBP2Q9BYJ0 223 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 LRRC2Q9BYS8 371 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 PLEKHA3Q9HB20 300 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 UBE2TQ9NPD8 197 aaPredicted RBP3.72□□□□□ -1.81
SMC4-224ENST00000494612 IL1RAPQ9NPH3 570 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 PNPLA3Q9NST1 481 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 PLEK2Q9NYT0 353 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 KCNK6Q9Y257 313 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 ZHX2Q9Y6X8 837 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 NOTCH2Q04721 2471 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 DIP2CQ9Y2E4 1556 aa3.72□□□□□ -1.81
SMC4-224ENST00000494612 CNTLNQ9NXG0 1405 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ARHGAP5Q13017 1502 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 CDK13Q14004 1512 aaKnown RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 ABCA6Q8N139 1617 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 TMEM129A0AVI4 362 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 SYCE3A1L190 88 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 GTPBP10A4D1E9 387 aaKnown RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 FAM149AA5PLN7 773 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 SLC15A5A6NIM6 579 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 MPTX1A8MV57 137 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 H7C423 109 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 DDX39AO00148 427 aaKnown RBP3.71□□□□□ -1.82
SMC4-224ENST00000494612 IDH3BO43837 385 aa3.71□□□□□ -1.82
SMC4-224ENST00000494612 ATP6V1G1O75348 118 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms