RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CBLP22681 906 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 KELP23276 732 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 GKP32189 559 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 CA5AP35218 305 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 PCYT1AP49585 367 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 RGS6P49758 472 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 MLLT10P55197 1068 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 CDH12P55289 794 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 NCS1P62166 190 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 RPS13P62277 151 aaKnown RBP10.98□□□□□ -0.65
RFC4-214ENST00000494047 CYP4F8P98187 520 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 ZP2Q05996 745 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 DPTQ07507 201 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.98□□□□□ -0.65
RFC4-214ENST00000494047 SLC25A30Q5SVS4 291 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 C19orf48Q6RUI8 117 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 NXPE4Q6UWF7 544 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 Q6ZVU0 165 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 VRK3Q8IV63 474 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 CMTM8Q8IZV2 173 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 C10orf111Q8N326 155 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 VN1R2Q8NFZ6 395 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 SUSD6Q92537 303 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 DNASE1L2Q92874 299 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 TP53INP1Q96A56 240 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 MOAP1Q96BY2 351 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 NEURL3Q96EH8 262 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 DTD2Q96FN9 168 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 PDXPQ96GD0 296 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 CEP19Q96LK0 163 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 RIPOR3Q96MK2 946 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 PKP4Q99569 1192 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 RIOK2Q9BVS4 552 aaKnown RBP10.98□□□□□ -0.65
RFC4-214ENST00000494047 MND1Q9BWT6 205 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 PHF7Q9BWX1 381 aaPredicted RBP10.98□□□□□ -0.65
RFC4-214ENST00000494047 TEX12Q9BXU0 123 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 S1PR5Q9H228 398 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 TRIM45Q9H8W5 580 aaPredicted RBP10.98□□□□□ -0.65
RFC4-214ENST00000494047 SPHK2Q9NRA0 654 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 RASSF1Q9NS23 344 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 ITM2BQ9Y287 266 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 PCDHGA3Q9Y5H0 932 aa10.98□□□□□ -0.65
RFC4-214ENST00000494047 FOXD2O60548 495 aaPredicted RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 MMP20O60882 483 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 GUCY1B2O75343 617 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 OSMP13725 252 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 HLA-EP13747 358 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 GSTM3P21266 225 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 S100A1P23297 94 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 PSMA1P25786 263 aaKnown RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 IFNA8P32881 189 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 CSTF2P33240 577 aaKnown RBP eCLIP10.97□□□□□ -0.65
RFC4-214ENST00000494047 IFNGR2P38484 337 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 IDH2P48735 452 aaKnown RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 STK19P49842 368 aaPredicted RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 MVDP53602 400 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 CRISP1P54107 249 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 HBA1P69905 142 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 SEMG2Q02383 582 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 EEF1A2Q05639 463 aaKnown RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 PIGFQ07326 219 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 ILKQ13418 452 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 GAB1Q13480 694 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 SLBPQ14493 270 aaKnown RBP eCLIP10.97□□□□□ -0.65
RFC4-214ENST00000494047 NCF4Q15080 339 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 ZXDCQ2QGD7 858 aaPredicted RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 ARMCX4Q5H9R4 360 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.97□□□□□ -0.65
RFC4-214ENST00000494047 PLAG1Q6DJT9 500 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 SYCE2Q6PIF2 218 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 CASP12Q6UXS9 341 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 CD300LDQ6UXZ3 194 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 RNF130Q86XS8 419 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 LYSMD2Q8IV50 215 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 DCUN1D3Q8IWE4 304 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 NAGSQ8N159 534 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 SLC5A8Q8N695 610 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 OR8J1Q8NGP2 316 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 UTP15Q8TED0 518 aaKnown RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 C16orf78Q8WTQ4 265 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 AUTS2Q8WXX7 1259 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 KLHL6Q8WZ60 621 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 AP3S1Q92572 193 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 SGCDQ92629 289 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 GGHQ92820 318 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 NEIL2Q969S2 332 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 RAB7BQ96AH8 199 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 ZBED6CLQ96FA7 236 aaPredicted RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 DHRS1Q96LJ7 313 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 COQ7Q99807 217 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 AIF1LQ9BQI0 150 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 C6orf62Q9GZU0 229 aaPredicted RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 RHBGQ9H310 441 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 TMEM245Q9H330 911 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 SFXN1Q9H9B4 322 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 ISYNA1Q9NPH2 558 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 ACSS1Q9NUB1 689 aaPredicted RBP10.97□□□□□ -0.65
RFC4-214ENST00000494047 TDP1Q9NUW8 608 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 EHD3Q9NZN3 535 aa10.97□□□□□ -0.65
RFC4-214ENST00000494047 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms