RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 RAI14Q9P0K7 980 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 C6orf203Q9P0P8 240 aaPredicted RBP4.02□□□□□ -1.77
GTF3A-208ENST00000493903 C19orf25Q9UFG5 118 aaPredicted RBP4.02□□□□□ -1.77
GTF3A-208ENST00000493903 BCAP29Q9UHQ4 241 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 PILRBQ9UKJ0 227 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 PILRAQ9UKJ1 303 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 RALYQ9UKM9 306 aaKnown RBP4.02□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF490Q9ULM2 529 aaPredicted RBP4.02□□□□□ -1.77
GTF3A-208ENST00000493903 ETV7Q9Y603 341 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 R4GN57 208 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 DENND4BO75064 1496 aaPredicted RBP4.02□□□□□ -1.77
GTF3A-208ENST00000493903 NUP153P49790 1475 aaKnown RBP4.02□□□□□ -1.77
GTF3A-208ENST00000493903 LTBP4Q8N2S1 1624 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 RAPGEF6Q8TEU7 1601 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 CFAP74Q9C0B2 1584 aa4.02□□□□□ -1.77
GTF3A-208ENST00000493903 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 ZMYM6O95789 1325 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 MAGI2Q86UL8 1455 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 ASPDHA6ND91 283 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF732B4DXR9 585 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 SOCS2O14508 198 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 GPRIN2O60269 458 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 MTX2O75431 263 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 TXNDC12O95881 172 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 CLUP10909 449 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 PSG1P11464 419 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 DAOP14920 347 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 SLC1A3P43003 542 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 DHPSP49366 369 aaPredicted RBP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 HOXA1P49639 335 aaPredicted RBP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 METAP1P53582 386 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 CDH11P55287 796 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 TUBA1BP68363 451 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 MFGE8Q08431 387 aaPredicted RBP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 MRPL28Q13084 256 aaKnown RBP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 DRP2Q13474 957 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 KEAP1Q14145 624 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 GRB14Q14449 540 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 HEPACAMQ14CZ8 416 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 SRSF7Q16629 238 aaKnown RBP eCLIP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 PDK4Q16654 411 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 POM121L1PQ3SYA9 428 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 CCDC152Q4G0S7 254 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 MTX3Q5HYI7 312 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 DCAF10Q5QP82 559 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 IRAK1BP1Q5VVH5 260 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 PLPP4Q5VZY2 271 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 ARHGAP17Q68EM7 881 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 G2E3Q7L622 706 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 LRRC70Q7Z2Q7 622 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 BNIPLQ7Z465 357 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 EIF1ADQ8N9N8 165 aaKnown RBP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 GPRC5AQ8NFJ5 357 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 OR52K2Q8NGK3 314 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 OR13C3Q8NGS6 347 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 OR4L1Q8NH43 312 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 OLIG1Q8TAK6 271 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 GIPC3Q8TF64 312 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 PHYHIPQ92561 330 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 TMEM45BQ96B21 275 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 MRPL53Q96EL3 112 aaKnown RBP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 SCRN2Q96FV2 425 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 MAGED4Q96JG8 741 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 LMLNQ96KR4 655 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 TTC25Q96NG3 672 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 TBCDQ9BTW9 1192 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 EBF2Q9HAK2 575 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 NMRK1Q9NWW6 199 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 RNF186Q9NXI6 227 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 PLEK2Q9NYT0 353 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 OR6C2Q9NZP2 312 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 ERVK-18Q9QC07 812 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 RABL2AQ9UBK7 228 aaPredicted RBP4.01□□□□□ -1.77
GTF3A-208ENST00000493903 COLEC10Q9Y6Z7 277 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 HECW1Q76N89 1606 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 POGZQ7Z3K3 1410 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 AKNAQ7Z591 1439 aa4.01□□□□□ -1.77
GTF3A-208ENST00000493903 EVPLQ92817 2033 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 SF3B1O75533 1304 aaKnown RBP eCLIP4□□□□□ -1.771e-6■■■■■ 64.6
GTF3A-208ENST00000493903 KIF16BQ96L93 1317 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 IQSEC2Q5JU85 1478 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 E9PMD0 336 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 SGK494L7N484 410 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 OVOL3O00110 214 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 CCSO14618 274 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 XPO1O14980 1071 aaKnown RBP4□□□□□ -1.77
GTF3A-208ENST00000493903 ATP6V0E1O15342 81 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 GLRA3O75311 464 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 MT-ND2P03891 347 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 ATP1B1P05026 303 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 ZNF12P17014 697 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 PAICSP22234 425 aaKnown RBP4□□□□□ -1.77
GTF3A-208ENST00000493903 ACKR3P25106 362 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 GJB2P29033 226 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 EPHA2P29317 976 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 AXLP30530 894 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 FUT6P51993 359 aa4□□□□□ -1.77
GTF3A-208ENST00000493903 GAS1P54826 345 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms