RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 GPR180Q86V85 440 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 SPACA3Q8IXA5 215 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 CACNA2D3Q8IZS8 1091 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 ZCCHC7Q8N3Z6 543 aaKnown RBP16.23■□□□□ 0.19
LIME1-208ENST00000493265 ESX1Q8N693 406 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 CEP70Q8NHQ1 597 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 ACTRT2Q8TDY3 377 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 C16orf78Q8WTQ4 265 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 MAELQ96JY0 434 aaKnown RBP16.23■□□□□ 0.19
LIME1-208ENST00000493265 LRFN5Q96NI6 719 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 TSSK3Q96PN8 268 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 SIKE1Q9BRV8 207 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 NPLQ9BXD5 320 aaPredicted RBP16.23■□□□□ 0.19
LIME1-208ENST00000493265 EPN3Q9H201 632 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 LYARQ9NX58 379 aaKnown RBP16.23■□□□□ 0.19
LIME1-208ENST00000493265 DAPP1Q9UN19 280 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 MAP4K5Q9Y4K4 846 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 ATG4BQ9Y4P1 393 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 SPACA6W5XKT8 324 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 CFAP46Q8IYW2 2715 aa16.23■□□□□ 0.19
LIME1-208ENST00000493265 GLOD5A6NK44 160 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 NPIPB8E9PQR5 432 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 AKAP10O43572 662 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 JRKO75564 520 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 LRATO95237 230 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 IL3P08700 152 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 PRR35P0CG20 571 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 BCKDHAP12694 445 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 PLA2G2AP14555 144 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 SDC1P18827 310 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 TCN2P20062 427 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 TACR1P25103 407 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 CD82P27701 267 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 ALDH9A1P49189 494 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 DIO3P55073 304 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 NME5P56597 212 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 RAB38P57729 211 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 OCA2Q04671 838 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 MAD2L1Q13257 205 aaPredicted RBP16.22■□□□□ 0.19
LIME1-208ENST00000493265 TGIF1Q15583 401 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 VWA2Q5GFL6 755 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 FAM69BQ5VUD6 431 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 C18orf63Q68DL7 685 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 SPATA21Q7Z572 469 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 MMP21Q8N119 569 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 IL22RA1Q8N6P7 574 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 CT55Q8WUE5 264 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 GFM2Q969S9 779 aaKnown RBP16.22■□□□□ 0.19
LIME1-208ENST00000493265 ZNF578Q96N58 590 aaPredicted RBP16.22■□□□□ 0.19
LIME1-208ENST00000493265 CATSPER2Q96P56 530 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 CSF3RQ99062 836 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 DPH2Q9BQC3 489 aaPredicted RBP16.22■□□□□ 0.19
LIME1-208ENST00000493265 TEX10Q9NXF1 929 aaPredicted RBP16.22■□□□□ 0.19
LIME1-208ENST00000493265 NOP53Q9NZM5 478 aaKnown RBP16.22■□□□□ 0.19
LIME1-208ENST00000493265 KCMF1Q9P0J7 381 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 KLHL14Q9P2G3 628 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 ZNF282Q9UDV7 671 aaPredicted RBP16.22■□□□□ 0.19
LIME1-208ENST00000493265 PHF11Q9UIL8 331 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 TMED5Q9Y3A6 229 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 ASB4Q9Y574 426 aa16.22■□□□□ 0.19
LIME1-208ENST00000493265 MGAQ8IWI9 3026 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 SDK2Q58EX2 2172 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 ZNF462Q96JM2 2506 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 ASH1LQ9NR48 2969 aaKnown RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 A0A1W2PR48 441 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 OR2W5A6NFC9 320 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 UBDO15205 165 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 SHOX2O60902 331 aaPredicted RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 ALDOCP09972 364 aaKnown RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 G6PDP11413 515 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 NCF2P19878 526 aaPredicted RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 ZNF763Q0D2J5 394 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 C2orf80Q0P641 193 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 MINDY4Q4G0A6 757 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 MRM1Q6IN84 353 aaKnown RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 GALNT18Q6P9A2 607 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 FAM198BQ6UWH4 519 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 OVCH1Q7RTY7 1134 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 SPATA19Q7Z5L4 167 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 TMEM151BQ8IW70 566 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 ZNF843Q8N446 348 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 UCN3Q969E3 161 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 TBC1D20Q96BZ9 403 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 TM4SF18Q96CE8 201 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 C11orf24Q96F05 449 aaPredicted RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 METTL2AQ96IZ6 378 aaKnown RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 SLC45A3Q96JT2 553 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 EGLN2Q96KS0 407 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 CCDC28BQ9BUN5 200 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 SOX17Q9H6I2 414 aaPredicted RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 LYRM4Q9HD34 91 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 MKKSQ9NPJ1 570 aaPredicted RBP16.21■□□□□ 0.19
LIME1-208ENST00000493265 SIRT5Q9NXA8 310 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 CROTQ9UKG9 612 aa16.21■□□□□ 0.19
LIME1-208ENST00000493265 WASHC1A8K0Z3 465 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 PROM1O43490 865 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 CNOT3O75175 753 aaKnown RBP16.2■□□□□ 0.18
LIME1-208ENST00000493265 GUCY1B2O75343 617 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 AIFM1O95831 613 aa16.2■□□□□ 0.18
LIME1-208ENST00000493265 FHP07954 510 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms