RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 LHPPQ9H008 270 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 NECTIN3Q9NQS3 549 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 NMRK1Q9NWW6 199 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 MS4A12Q9NXJ0 267 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 KCMF1Q9P0J7 381 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 PHF11Q9UIL8 331 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 ZNF451Q9Y4E5 1061 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 TIMM22Q9Y584 194 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 ACTL7BQ9Y614 415 aa12.01□□□□□ -0.49
CLIP2-209ENST00000493166 A0A0A6YYD5 115 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 TCRBV16S1A1N1A0A5B0 115 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 ARHGAP10A1A4S6 786 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 BLACEA4D250 179 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 K7EM74 188 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 TM9SF1O15321 606 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 ZWINTO95229 277 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 BPGMP07738 259 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 ICAM2P13598 275 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 BUD31P41223 144 aaPredicted RBP12□□□□□ -0.49
CLIP2-209ENST00000493166 HTR6P50406 440 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 AP2B1P63010 937 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 TNFRSF17Q02223 184 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 ZNF33BQ06732 778 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 Q0VFX4 171 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 PAPD4Q6PIY7 484 aaKnown RBP12□□□□□ -0.49
CLIP2-209ENST00000493166 CLNKQ7Z7G1 428 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 GPR180Q86V85 440 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 SCUBE1Q8IWY4 988 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 LPAR4Q99677 370 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 TRMOQ9BU70 441 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 SHCBP1LQ9BZQ2 653 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 DDX31Q9H8H2 851 aaKnown RBP12□□□□□ -0.49
CLIP2-209ENST00000493166 MLXIPLQ9NP71 852 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 KCNK9Q9NPC2 374 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 LYARQ9NX58 379 aaKnown RBP12□□□□□ -0.49
CLIP2-209ENST00000493166 PCDHGB7Q9Y5F8 929 aa12□□□□□ -0.49
CLIP2-209ENST00000493166 PRRC2CQ9Y520 2896 aaKnown RBP12□□□□□ -0.49
CLIP2-209ENST00000493166 IGKV3D-11A0A0A0MRZ8 115 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 SYNDIG1LA6NDD5 238 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 TMPRSS11DO60235 418 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 NPHS1O60500 1241 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 C1QL1O75973 258 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 GBAP04062 536 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 PDGFAP04085 211 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 SERPINA7P05543 415 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 KLK1P06870 262 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 UQCRHP07919 91 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 CELA2AP08217 269 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 FAM58BPP0C7Q3 252 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 PRR35P0CG20 571 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 TLX1P31314 330 aaPredicted RBP11.99□□□□□ -0.49
CLIP2-209ENST00000493166 ETV4P43268 484 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 SERPINB4P48594 390 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 FOXA1P55317 472 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 HNRNPH2P55795 449 aaKnown RBP11.99□□□□□ -0.49
CLIP2-209ENST00000493166 EXT1Q16394 746 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 BTBD16Q32M84 506 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 CCNYL2Q5T2Q4 361 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 AGAP7PQ5VUJ5 663 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 PLAG1Q6DJT9 500 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 MRM1Q6IN84 353 aaKnown RBP11.99□□□□□ -0.49
CLIP2-209ENST00000493166 RIPOR1Q6ZS17 1223 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 ZCCHC23Q6ZST2 131 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 COMMD6Q7Z4G1 85 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 CUZD1Q86UP6 607 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 PTRH1Q86Y79 214 aaKnown RBP11.99□□□□□ -0.49
CLIP2-209ENST00000493166 NUDCD3Q8IVD9 361 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 METTL4Q8N3J2 472 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 ZNF843Q8N446 348 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 GBP7Q8N8V2 638 aaPredicted RBP11.99□□□□□ -0.49
CLIP2-209ENST00000493166 IMMP1LQ96LU5 166 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 AGAP4Q96P64 663 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 SMAD5Q99717 465 aaKnown RBP11.99□□□□□ -0.49
CLIP2-209ENST00000493166 WDR77Q9BQA1 342 aaPredicted RBP11.99□□□□□ -0.49
CLIP2-209ENST00000493166 ACPTQ9BZG2 426 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 ZNF552Q9H707 407 aaPredicted RBP11.99□□□□□ -0.49
CLIP2-209ENST00000493166 TMBIM4Q9HC24 238 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 VPS29Q9UBQ0 182 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 ADAM29Q9UKF5 820 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 ATG4BQ9Y4P1 393 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 ASB4Q9Y574 426 aa11.99□□□□□ -0.49
CLIP2-209ENST00000493166 WDR91A4D1P6 747 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 SAGE2PA6NJ88 616 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 A8MUA0 341 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 PROM1O43490 865 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 CTNSO60931 367 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 LDB3O75112 727 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 NR2F6P10588 404 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 UROSP10746 265 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 MAPK12P53778 367 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 SLC26A5P58743 744 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 HMGCS1Q01581 520 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 GALNT1Q10472 559 aaPredicted RBP11.98□□□□□ -0.49
CLIP2-209ENST00000493166 STX4Q12846 297 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 IMPG1Q17R60 797 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 C18orf63Q68DL7 685 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 CLEC6AQ6EIG7 209 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
CLIP2-209ENST00000493166 SCIMPQ6UWF3 145 aa11.98□□□□□ -0.49
CLIP2-209ENST00000493166 C1orf52Q8N6N3 182 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms