RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 ELAVL1Q15717 326 aaKnown RBP12.66□□□□□ -0.38
SAMM50-204ENST00000493161 HP1BP3Q5SSJ5 553 aaPredicted RBP12.66□□□□□ -0.38
SAMM50-204ENST00000493161 PRAMEF9Q5VWM5 478 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 TRMT10BQ6PF06 316 aaKnown RBP12.66□□□□□ -0.38
SAMM50-204ENST00000493161 GK5Q6ZS86 529 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 FAM47EQ6ZV65 393 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 SEM1Q6ZVN7 128 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 ZNF595Q8IYB9 648 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 TMEM132CQ8N3T6 1108 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 RASGEF1CQ8N431 466 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 MYRIPQ8NFW9 859 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 CERS2Q96G23 380 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 PDLIM5Q96HC4 596 aaKnown RBP12.66□□□□□ -0.38
SAMM50-204ENST00000493161 NPLQ9BXD5 320 aaPredicted RBP12.66□□□□□ -0.38
SAMM50-204ENST00000493161 ALOXE3Q9BYJ1 711 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 SLC24A3Q9HC58 644 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 KCNE2Q9Y6J6 123 aa12.66□□□□□ -0.38
SAMM50-204ENST00000493161 B3GALT2O43825 422 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 SUSD5O60279 629 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 WDR47O94967 919 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 ETHE1O95571 254 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 RFPL3SP0C7P2 107 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 WNT3P56703 355 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 RNF4P78317 190 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 ADAM8P78325 824 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 ID2Q02363 134 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 ZNF460Q14592 562 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 SLC10A1Q14973 349 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 CYP1B1Q16678 543 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 HYAL4Q2M3T9 481 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 SLC25A35Q3KQZ1 300 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 SPANXN3Q5MJ09 141 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 TMIGD1Q6UXZ0 262 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 CDC20BQ86Y33 519 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 RELL2Q8NC24 303 aaPredicted RBP12.65□□□□□ -0.38
SAMM50-204ENST00000493161 NAXEQ8NCW5 288 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 MORN4Q8NDC4 146 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 TRIM58Q8NG06 486 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 RMND5BQ96G75 393 aaPredicted RBP12.65□□□□□ -0.38
SAMM50-204ENST00000493161 SMR3AQ99954 134 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 LDAHQ9H6V9 325 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 PPANQ9NQ55 473 aaKnown RBP12.65□□□□□ -0.38
SAMM50-204ENST00000493161 SACM1LQ9NTJ5 587 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 VTI1BQ9UEU0 232 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 DAPP1Q9UN19 280 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 ATG4BQ9Y4P1 393 aa12.65□□□□□ -0.38
SAMM50-204ENST00000493161 NCKAP5O14513 1909 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 C17orf105B2RV13 164 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 CTNSO60931 367 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 WDR1O75083 606 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 LDB3O75112 727 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 P04436 131 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 ZNF37AP17032 561 aaPredicted RBP12.64□□□□□ -0.39
SAMM50-204ENST00000493161 DNASE1P24855 282 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 UQCRC1P31930 480 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 SLC6A12P48065 614 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 ADPRMQ3LIE5 342 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 FBXO48Q5FWF7 155 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 WLSQ5T9L3 541 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 RIPPLY2Q5TAB7 128 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 FAM45BPQ6NSW5 357 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 ABHD17CQ6PCB6 329 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 ZNF662Q6ZS27 426 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 Q71RC1 249 aaPredicted RBP12.64□□□□□ -0.39
SAMM50-204ENST00000493161 UBE3DQ7Z6J8 389 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 GALNT7Q86SF2 657 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 GOLM1Q8NBJ4 401 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 OR2L5Q8NG80 312 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 FAM45AQ8TCE6 357 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 SLC2A12Q8TD20 617 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 ANKRD49Q8WVL7 239 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 CAPZA3Q96KX2 299 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 SERINC2Q96SA4 455 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 EGFL8Q99944 293 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 WDR83Q9BRX9 315 aaKnown RBP12.64□□□□□ -0.39
SAMM50-204ENST00000493161 REXO4Q9GZR2 422 aaKnown RBP12.64□□□□□ -0.39
SAMM50-204ENST00000493161 EXO5Q9H790 373 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 DMRT3Q9NQL9 472 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 PRDM7Q9NQW5 492 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 ZNF490Q9ULM2 529 aaPredicted RBP12.64□□□□□ -0.39
SAMM50-204ENST00000493161 CBLCQ9ULV8 474 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 PSAT1Q9Y617 370 aa12.64□□□□□ -0.39
SAMM50-204ENST00000493161 TRGV5A0A0B4J1U4 118 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 A6NNC1 897 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 SYT5O00445 386 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 H2AFYO75367 372 aaKnown RBP12.63□□□□□ -0.39
SAMM50-204ENST00000493161 CLEC3AO75596 197 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 TTC4O95801 387 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 DRD2P14416 443 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 GNAZP19086 355 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 TNNI3P19429 210 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 MTTPP55157 894 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 ASPHQ12797 758 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 STX4Q12846 297 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 TSNQ15631 228 aaKnown RBP12.63□□□□□ -0.39
SAMM50-204ENST00000493161 ZNF791Q3KP31 576 aaPredicted RBP12.63□□□□□ -0.39
SAMM50-204ENST00000493161 BBS9Q3SYG4 887 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 PRAMEF20Q5VT98 475 aa12.63□□□□□ -0.39
SAMM50-204ENST00000493161 ZNF793Q6ZN11 406 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms