RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 HIST1H1TP22492 207 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-205ENST00000492851 ATP5A1P25705 553 aaKnown RBP11.59□□□□□ -0.55
COL6A1-205ENST00000492851 CERS1P27544 350 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 PPP2R1BP30154 601 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 TLX1P31314 330 aaPredicted RBP11.59□□□□□ -0.55
COL6A1-205ENST00000492851 PIK3CBP42338 1070 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 MSH2P43246 934 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 ST13P50502 369 aaKnown RBP11.59□□□□□ -0.55
COL6A1-205ENST00000492851 GPX6P59796 221 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 PHEXP78562 749 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 TBL3Q12788 808 aaKnown RBP11.59□□□□□ -0.55
COL6A1-205ENST00000492851 FAM83EQ2M2I3 478 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 KBTBD12Q3ZCT8 623 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 NDUFAF5Q5TEU4 345 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 OPN5Q6U736 354 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 VN1R5Q7Z5H4 357 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 ACOT4Q8N9L9 421 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 RHEBL1Q8TAI7 183 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 FAM57AQ8TBR7 257 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 ZNF473Q8WTR7 871 aaKnown RBP11.59□□□□□ -0.55
COL6A1-205ENST00000492851 CA5BP1Q8WTZ4 195 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 TANKQ92844 425 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 ESAMQ96AP7 390 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 REPS1Q96D71 796 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 RBM18Q96H35 190 aaKnown RBP11.59□□□□□ -0.55
COL6A1-205ENST00000492851 MS4A8Q9BY19 250 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 ALG9Q9H6U8 611 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.59□□□□□ -0.551e-5■■■■□ 19.8
COL6A1-205ENST00000492851 GRHL1Q9NZI5 618 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 KCMF1Q9P0J7 381 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 COPS7AQ9UBW8 275 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 TSC22D4Q9Y3Q8 395 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 ANGPTL3Q9Y5C1 460 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 PCDHGA11Q9Y5H2 935 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 CLDN16Q9Y5I7 305 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 CRYBG3Q68DQ2 2970 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 CROCCQ5TZA2 2017 aa11.59□□□□□ -0.55
COL6A1-205ENST00000492851 MYO9AB2RTY4 2548 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 SUPT3HB4E1H0 165 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 UGDHO60701 494 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 SUPT3HO75486 399 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 SCELO95171 688 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 SLC35E2BP0CK96 405 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PCNAP12004 261 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 CPN2P22792 545 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PTX3P26022 381 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 GRNP28799 593 aaKnown RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 SSTR2P30874 369 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PHBP35232 272 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PIK3CGP48736 1102 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 HNRNPFP52597 415 aaKnown RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 ETF1P62495 437 aaKnown RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 MRPS25P82663 173 aaKnown RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 RNFT1Q5M7Z0 435 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 DEPDC1Q5TB30 811 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 KHDRBS2Q5VWX1 349 aaKnown RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 LIPJQ5W064 366 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 OR4C11Q6IEV9 310 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 METTL2BQ6P1Q9 378 aaKnown RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 KLC3Q6P597 504 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 RTL4Q6ZR62 310 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 MDGA2Q7Z553 956 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 CLNKQ7Z7G1 428 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 SLC22A16Q86VW1 577 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 CCDC25Q86WR0 208 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 GOLM1Q8NBJ4 401 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PSD4Q8NDX1 1056 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 TMEM52Q8NDY8 209 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 OR7G3Q8NG95 312 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 FBXO25Q8TCJ0 367 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 FBF1Q8TES7 1133 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PTPMT1Q8WUK0 201 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 UBTD2Q8WUN7 234 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 ASB5Q8WWX0 329 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 RGMAQ96B86 450 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 ART5Q96L15 291 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 SPOCK3Q9BQ16 436 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 TSPYL1Q9H0U9 437 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 TP63Q9H3D4 680 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PSD3Q9NYI0 1048 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PHF11Q9UIL8 331 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 ZNF223Q9UK11 482 aaPredicted RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PYCARDQ9ULZ3 195 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 PPT2Q9UMR5 302 aa11.58□□□□□ -0.56
COL6A1-205ENST00000492851 TNPO3Q9Y5L0 923 aaKnown RBP11.58□□□□□ -0.56
COL6A1-205ENST00000492851 A0A1B0GTH9 108 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 C17orf105B2RV13 164 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 HS6ST1O60243 411 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 CDC40O60508 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL6A1-205ENST00000492851 PRAMEF4O60810 478 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 TGFB1P01137 390 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 C1QAP02745 245 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 TPOP07202 933 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 PRF1P14222 555 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 EPORP19235 508 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 CD22P20273 847 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 CNR1P21554 472 aa11.57□□□□□ -0.56
COL6A1-205ENST00000492851 SSR2P43308 183 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms