RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ITGA10O75578 1167 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 ZFAND5O76080 213 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 ALDH18A1P54886 795 aaKnown RBP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 RBPJQ06330 500 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 RCN2Q14257 317 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 AP5B1Q2VPB7 878 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 KHDRBS2Q5VWX1 349 aaKnown RBP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 TMEM132CQ8N3T6 1108 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 CPSF7Q8N684 471 aaKnown RBP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 FAM98AQ8NCA5 519 aaKnown RBP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 HUS1BQ8NHY5 278 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 ITLN2Q8WWU7 325 aaPredicted RBP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF592Q92610 1267 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 ANKRD9Q96BM1 317 aaPredicted RBP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 CMTM7Q96FZ5 175 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 CCDC120Q96HB5 630 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 LIN28AQ9H9Z2 209 aaKnown RBP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF358Q9NW07 568 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 MTRF1LQ9UGC7 380 aaKnown RBP16.76■□□□□ 0.27
HMGN1-219ENST00000491183 SH3BGRL2Q9UJC5 107 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF835Q9Y2P0 537 aa16.76■□□□□ 0.27
HMGN1-219ENST00000491183 GTF3C1Q12789 2109 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 ZNHIT1O43257 154 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 ASNA1O43681 348 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 SIX3O95343 332 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-219ENST00000491183 IFNA16P05015 189 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 GFAPP14136 432 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 ECHS1P30084 290 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 SERPINB1P30740 379 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 SERPINB8P50452 374 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 ID2Q02363 134 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 DDX39BQ13838 428 aaKnown RBP16.75■□□□□ 0.27
HMGN1-219ENST00000491183 PCBP2Q15366 365 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGN1-219ENST00000491183 C3AR1Q16581 482 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 TECRLQ5HYJ1 363 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 LIPJQ5W064 366 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 OR4C11Q6IEV9 310 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 MDGA2Q7Z553 956 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF321PQ8N8H1 164 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 SLC44A1Q8WWI5 657 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 IFT81Q8WYA0 676 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 VPS11Q9H270 941 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 ADGRE2Q9UHX3 823 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 TSC22D4Q9Y3Q8 395 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 ANGPTL3Q9Y5C1 460 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 CLCA3PQ9Y6N3 262 aa16.75■□□□□ 0.27
HMGN1-219ENST00000491183 ACSL3O95573 720 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 MLYCDO95822 493 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 PIK3CBP42338 1070 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 SSR2P43308 183 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 MAGEA12P43365 314 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 RPS13P62277 151 aaKnown RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 STX4Q12846 297 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 SLAMF1Q13291 335 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 GTF2H2Q13888 395 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 GTF2H2CQ6P1K8 395 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 Q6ZPB1 254 aaPredicted RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 CEP128Q6ZU80 1094 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 GOLGA7Q7Z5G4 137 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 MYLK4Q86YV6 388 aaPredicted RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 SPPL2CQ8IUH8 684 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 SULF2Q8IWU5 870 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 CHERPQ8IWX8 916 aaKnown RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 TMEM156Q8N614 296 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 MORN4Q8NDC4 146 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 SREK1Q8WXA9 508 aaKnown RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 DAZLQ92904 295 aaKnown RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 ISL2Q96A47 359 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 TMEM125Q96AQ2 219 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 RGMAQ96B86 450 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 MTERF1Q99551 399 aaKnown RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 CCDC77Q9BR77 488 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 IPPKQ9H8X2 491 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 ACTR8Q9H981 624 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 PRM3Q9NNZ6 103 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 DMRT3Q9NQL9 472 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 CPSF2Q9P2I0 782 aaKnown RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 TINAGQ9UJW2 476 aa16.74■□□□□ 0.27
HMGN1-219ENST00000491183 YARS2Q9Y2Z4 477 aaKnown RBP16.74■□□□□ 0.27
HMGN1-219ENST00000491183 SYNDIG1LA6NDD5 238 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 H0YIV9 168 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 PLPP1O14494 284 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 OR2J2O76002 312 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 TNNI3P19429 210 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 CPN2P22792 545 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 MEOX1P50221 254 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 HSF1Q00613 529 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 SERTAD2Q14140 314 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 SP5Q6BEB4 398 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-219ENST00000491183 KLC3Q6P597 504 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 OR4N5Q8IXE1 308 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 CYP4Z2PQ8N1L4 340 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 FMO2Q99518 471 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 ZNF717Q9BY31 904 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-219ENST00000491183 MYOTQ9UBF9 498 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 SUCOQ9UBS9 1254 aaKnown RBP16.73■□□□□ 0.27
HMGN1-219ENST00000491183 KLF13Q9Y2Y9 288 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-219ENST00000491183 RNF11Q9Y3C5 154 aa16.73■□□□□ 0.27
HMGN1-219ENST00000491183 PCDHGA11Q9Y5H2 935 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms