RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 ZNF740Q8NDX6 193 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 M1APQ8TC57 530 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 ELP5Q8TE02 316 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 PHF10Q8WUB8 498 aaKnown RBP7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 APOPT1Q96IL0 206 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 ZNF354BQ96LW1 612 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 ATOH8Q96SQ7 321 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 SH3GL2Q99962 352 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 HAUS8Q9BT25 410 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 AICDAQ9GZX7 198 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 RUBCNLQ9H714 662 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 C19orf25Q9UFG5 118 aaPredicted RBP7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 HRH3Q9Y5N1 445 aa7.9□□□□□ -1.14
PCOLCE-209ENST00000490909 IGKV3D-11A0A0A0MRZ8 115 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 NPEPPSL1A6NEC2 478 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 MAGEB17A8MXT2 336 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 HMGB1P1B2RPK0 211 aaPredicted RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 H3BQF6 201 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 STX16-NPEPL1H3BU86 382 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 STX16O14662 325 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 TM9SF1O15321 606 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ASNA1O43681 348 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ZWINTO95229 277 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 SP1P08047 785 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ESRRAP11474 423 aaPredicted RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ABOP16442 354 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ATP5F1P24539 256 aaPredicted RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 SMSP52788 366 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 PGGT1BP53609 377 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ALDH18A1P54886 795 aaKnown RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 CASP6P55212 293 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 IRF9Q00978 393 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 OC90Q02509 493 aaPredicted RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 TLE4Q04727 773 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 PCDH1Q08174 1060 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 DLG1Q12959 904 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 NSDHLQ15738 373 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 CMPK2Q5EBM0 449 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 AGTRAPQ6RW13 159 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ASPGQ86U10 573 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 CD163Q86VB7 1156 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 EXOC3L1Q86VI1 746 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 LGI4Q8N135 537 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 PLD6Q8N2A8 252 aaKnown RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 GHDCQ8N2G8 530 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 SLC5A8Q8N695 610 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 TMEM178AQ8NBL3 297 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 OR56A3Q8NH54 315 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 UBTD2Q8WUN7 234 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 SREK1Q8WXA9 508 aaKnown RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 RHBDF1Q96CC6 855 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 TLCD1Q96CP7 247 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 SCYL1Q96KG9 808 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 OR4K3Q96R72 315 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 OR1F2PQ96R84 312 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 LPAR4Q99677 370 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 EGFL8Q99944 293 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 SGPP1Q9BX95 441 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ATG10Q9H0Y0 220 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 CENPHQ9H3R5 247 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ALG9Q9H6U8 611 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 TRIM45Q9H8W5 580 aaPredicted RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 MCCC2Q9HCC0 563 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ANKHQ9HCJ1 492 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 TMEM184CQ9NVA4 438 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 GPRC5BQ9NZH0 403 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 CD274Q9NZQ7 290 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 LRFN1Q9P244 771 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 ZNF223Q9UK11 482 aaPredicted RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 PTBP2Q9UKA9 531 aaKnown RBP7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 IKZF3Q9UKT9 509 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 PLLPQ9Y342 182 aa7.89□□□□□ -1.15
PCOLCE-209ENST00000490909 SAGE2PA6NJ88 616 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 SUPT3HB4E1H0 165 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 E9PLN8 166 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 TGFBR3LH3BV60 316 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 GOLGA8RI6L899 631 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 NDUFS4O43181 175 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 TYROBPO43914 113 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 PLIN3O60664 434 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 GALR3O60755 368 aaPredicted RBP7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 SUPT3HO75486 399 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 STK16O75716 305 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 SNUPNO95149 360 aaKnown RBP7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 FHP07954 510 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 SLC35G6P0C7Q6 338 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 MTHFD2P13995 350 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 GFAPP14136 432 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 CD46P15529 392 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 MAOAP21397 527 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 DNAJB13P59910 316 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 BTG2P78543 158 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 HYAL2Q12891 473 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 SETDB1Q15047 1291 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 PCBP2Q15366 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 OR4D1Q15615 310 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 DEFB134Q4QY38 66 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 KRTCAP3Q53RY4 240 aa7.88□□□□□ -1.15
PCOLCE-209ENST00000490909 SLC25A25Q6KCM7 469 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms