RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 DEPDC1Q5TB30 811 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 C1QL3Q5VWW1 255 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 GTF2H2CQ6P1K8 395 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 MAMDC2Q7Z304 686 aaPredicted RBP29.26■■■□□ 2.27
LDB1-204ENST00000490751 DMRT3Q9NQL9 472 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 PCDHGA11Q9Y5H2 935 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 TNPO3Q9Y5L0 923 aaKnown RBP29.26■■■□□ 2.27
LDB1-204ENST00000490751 SPACA6W5XKT8 324 aa29.26■■■□□ 2.27
LDB1-204ENST00000490751 DIDO1Q9BTC0 2240 aaKnown RBP29.26■■■□□ 2.27
LDB1-204ENST00000490751 CROCCQ5TZA2 2017 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 MYOCOSA0A1B0GUC4 107 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 SLC25A12O75746 678 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 KRT38O76015 456 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 IFNA16P05015 189 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 GPR143P51810 404 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 STX4Q12846 297 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 FJX1Q86VR8 437 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 PTGR2Q8N8N7 351 aaPredicted RBP29.25■■■□□ 2.27
LDB1-204ENST00000490751 MTERF1Q99551 399 aaKnown RBP29.25■■■□□ 2.27
LDB1-204ENST00000490751 SORBS1Q9BX66 1292 aaKnown RBP29.25■■■□□ 2.27
LDB1-204ENST00000490751 TRIM45Q9H8W5 580 aaPredicted RBP29.25■■■□□ 2.27
LDB1-204ENST00000490751 IPPKQ9H8X2 491 aa29.25■■■□□ 2.27
LDB1-204ENST00000490751 A0A087WUV0 522 aaPredicted RBP29.24■■■□□ 2.27
LDB1-204ENST00000490751 A0A1B0GUH1 482 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 ASPDHA6ND91 283 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 RBP1P09455 135 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 TRHRP34981 398 aaPredicted RBP29.24■■■□□ 2.27
LDB1-204ENST00000490751 PIK3CBP42338 1070 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 PIK3CGP48736 1102 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 HLCSP50747 726 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 RAP1GDS1P52306 607 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 MAPKAPK3Q16644 382 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 ZNF227Q86WZ6 799 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 TMEM132CQ8N3T6 1108 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 CEP112Q8N8E3 955 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 FAM98AQ8NCA5 519 aaKnown RBP29.24■■■□□ 2.27
LDB1-204ENST00000490751 DCAKDQ8WVC6 231 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 SCYL1Q96KG9 808 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 FRMD6Q96NE9 622 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 CCDC77Q9BR77 488 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 ALOXE3Q9BYJ1 711 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 XPR1Q9UBH6 696 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 ZNF180Q9UJW8 692 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 TSC22D4Q9Y3Q8 395 aa29.24■■■□□ 2.27
LDB1-204ENST00000490751 NBPF19A0A087WUL8 3843 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 TRIM49D1C9J1S8 452 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 UGDHO60701 494 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 LDB3O75112 727 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 WISP2O76076 250 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 CPN2P22792 545 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 RPS13P62277 151 aaKnown RBP29.23■■■□□ 2.27
LDB1-204ENST00000490751 CPSF6Q16630 551 aaKnown RBP eCLIP29.23■■■□□ 2.27
LDB1-204ENST00000490751 OR4C11Q6IEV9 310 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 METTL2BQ6P1Q9 378 aaKnown RBP29.23■■■□□ 2.27
LDB1-204ENST00000490751 PNPLA5Q7Z6Z6 429 aaPredicted RBP29.23■■■□□ 2.27
LDB1-204ENST00000490751 RGMAQ96B86 450 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 CENPKQ9BS16 269 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 VTI1BQ9UEU0 232 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 NFU1Q9UMS0 254 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 CLCA3PQ9Y6N3 262 aa29.23■■■□□ 2.27
LDB1-204ENST00000490751 H0YIV9 168 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 NME2P1O60361 137 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 NME2P22392 152 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 CNTFP26441 200 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 PHEXP78562 749 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 ALDH6A1Q02252 535 aaKnown RBP29.22■■■□□ 2.27
LDB1-204ENST00000490751 TSNAXIP1Q2TAA8 658 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 DAZLQ92904 295 aaKnown RBP29.22■■■□□ 2.27
LDB1-204ENST00000490751 REPS1Q96D71 796 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 PHF21BQ96EK2 531 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 RNF11Q9Y3C5 154 aa29.22■■■□□ 2.27
LDB1-204ENST00000490751 PLPP1O14494 284 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 PRKNO60260 465 aaPredicted RBP29.21■■■□□ 2.27
LDB1-204ENST00000490751 ITGA10O75578 1167 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 ZFAND5O76080 213 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 ID2Q02363 134 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 RBPJQ06330 500 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 SLAMF1Q13291 335 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 SERTAD2Q14140 314 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 OR14A16Q8NHC5 309 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 PTPMT1Q8WUK0 201 aaPredicted RBP29.21■■■□□ 2.27
LDB1-204ENST00000490751 RELTQ969Z4 430 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 TMEM125Q96AQ2 219 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 TSPAN10Q9H1Z9 355 aaPredicted RBP29.21■■■□□ 2.27
LDB1-204ENST00000490751 TMCO1Q9UM00 188 aa29.21■■■□□ 2.27
LDB1-204ENST00000490751 TRGV8A0A0C4DH27 118 aa29.2■■■□□ 2.26
LDB1-204ENST00000490751 COL6A2P12110 1019 aa29.2■■■□□ 2.26
LDB1-204ENST00000490751 TMEM156Q8N614 296 aa29.2■■■□□ 2.26
LDB1-204ENST00000490751 L3MBTL4Q8NA19 623 aa29.2■■■□□ 2.26
LDB1-204ENST00000490751 ANKRD9Q96BM1 317 aaPredicted RBP29.2■■■□□ 2.26
LDB1-204ENST00000490751 GPR137Q96N19 417 aa29.2■■■□□ 2.26
LDB1-204ENST00000490751 NOL11Q9H8H0 719 aaKnown RBP29.2■■■□□ 2.26
LDB1-204ENST00000490751 EXOC1LA0A1B0GW35 172 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 STX16-NPEPL1H3BU86 382 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 OR7A17O14581 309 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 STX16O14662 325 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 ZG16O60844 167 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 SMIM24O75264 130 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 CLDN9O95484 217 aa29.19■■■□□ 2.26
LDB1-204ENST00000490751 MLYCDO95822 493 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms