RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TECRLQ5HYJ1 363 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 TMPRSS11BQ86T26 416 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 MCEMP1Q8IX19 187 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 SHISA5Q8N114 240 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 ARMC10Q8N2F6 343 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 TMEM151AQ8N4L1 468 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 ANKRD53Q8N9V6 530 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 EPS8L3Q8TE67 593 aaKnown RBP9.7□□□□□ -0.86
TTC28-207ENST00000490475 UTP15Q8TED0 518 aaKnown RBP9.7□□□□□ -0.86
TTC28-207ENST00000490475 MZB1Q8WU39 189 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 PHF10Q8WUB8 498 aaKnown RBP9.7□□□□□ -0.86
TTC28-207ENST00000490475 GAL3ST3Q96A11 431 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 MTBPQ96DY7 904 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 FRMD6Q96NE9 622 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 DEFB126Q9BYW3 111 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 CDCP1Q9H5V8 836 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 KLHL1Q9NR64 748 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 RYDENQ9NUL5 291 aaKnown RBP9.7□□□□□ -0.86
TTC28-207ENST00000490475 CPSF2Q9P2I0 782 aaKnown RBP9.7□□□□□ -0.86
TTC28-207ENST00000490475 FETUBQ9UGM5 382 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 ZNF490Q9ULM2 529 aaPredicted RBP9.7□□□□□ -0.86
TTC28-207ENST00000490475 NCOA6Q14686 2063 aaPredicted RBP9.7□□□□□ -0.86
TTC28-207ENST00000490475 CACNA1CQ13936 2221 aa9.7□□□□□ -0.86
TTC28-207ENST00000490475 TLDC2A0PJX2 215 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 ZNF860A6NHJ4 632 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 FAM227AF5H4B4 570 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 CLGNO14967 610 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 ASNA1O43681 348 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 KLK8O60259 260 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 NME2P1O60361 137 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 B4GALT2O60909 372 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 DNAJB6O75190 326 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 NEURL1O76050 574 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 SIX3O95343 332 aaPredicted RBP9.69□□□□□ -0.86
TTC28-207ENST00000490475 B3GALT4O96024 378 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 RBP1P09455 135 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 PYGBP11216 843 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 ABOP16442 354 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 CD22P20273 847 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 NME2P22392 152 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 APCP25054 2843 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 HNF4AP41235 474 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 HLCSP50747 726 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 HSD17B7P56937 341 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 MLF1P58340 268 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 CHIT1Q13231 466 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 SLBPQ14493 270 aaKnown RBP eCLIP9.69□□□□□ -0.86
TTC28-207ENST00000490475 TSNAXIP1Q2TAA8 658 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 XKR6Q5GH73 641 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 FCRLBQ6BAA4 426 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 SPINK14Q6IE38 97 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 EMBQ6PCB8 327 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 GALNTL5Q7Z4T8 443 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 GPALPP1Q8IXQ4 340 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 TEX9Q8N6V9 391 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 SRFBP1Q8NEF9 429 aaKnown RBP9.69□□□□□ -0.86
TTC28-207ENST00000490475 OR5T3Q8NGG3 340 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 TSLPQ969D9 159 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 PHF21BQ96EK2 531 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 SIGLEC12Q96PQ1 595 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 MRPL57Q9BQC6 102 aaKnown RBP9.69□□□□□ -0.86
TTC28-207ENST00000490475 ROGDIQ9GZN7 287 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 EHD1Q9H4M9 534 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 KLHL31Q9H511 634 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 NT5DC2Q9H857 520 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 GPRC5BQ9NZH0 403 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 TMEM216Q9P0N5 145 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 OPTCQ9UBM4 332 aa9.69□□□□□ -0.86
TTC28-207ENST00000490475 IGKV3D-11A0A0A0MRZ8 115 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 CCDC189A1A4V9 331 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 ERICH4A6NGS2 130 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 ANKDD1BA6NHY2 528 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 NPIPA5E9PKD4 350 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 E9PLN8 166 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 H3BQF6 201 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 K7EPI3 171 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 CLDN14O95500 239 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 SMIM10L1P0DMW3 83 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 EPB42P16452 691 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 SSTR2P30874 369 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 CASP2P42575 452 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 ALDH18A1P54886 795 aaKnown RBP9.68□□□□□ -0.86
TTC28-207ENST00000490475 IRF8Q02556 426 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 HYAL2Q12891 473 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 SETDB1Q15047 1291 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 PCBP2Q15366 365 aaKnown RBP eCLIP9.68□□□□□ -0.86
TTC28-207ENST00000490475 ADNP2Q6IQ32 1131 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 TRIM40Q6P9F5 258 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 PAOXQ6QHF9 649 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 TMIGD1Q6UXZ0 262 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 SH2D5Q6ZV89 423 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 LRRC70Q7Z2Q7 622 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 TDRPQ86YL5 185 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 SRRM1Q8IYB3 904 aaKnown RBP9.68□□□□□ -0.86
TTC28-207ENST00000490475 ZNF595Q8IYB9 648 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 TMEM156Q8N614 296 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 PTGR2Q8N8N7 351 aaPredicted RBP9.68□□□□□ -0.86
TTC28-207ENST00000490475 B3GNT7Q8NFL0 401 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 CREB3L4Q8TEY5 395 aa9.68□□□□□ -0.86
TTC28-207ENST00000490475 UBTD2Q8WUN7 234 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms