RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CD9P21926 228 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 TMEM115Q12893 351 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 SSX6Q7RTT6 188 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 IFNLR1Q8IU57 520 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 MFSD2AQ8NA29 543 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 PTPN18Q99952 460 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 PKP2Q99959 881 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 TSSK6Q9BXA6 273 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF350Q9GZX5 532 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF696Q9H7X3 374 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 ENPP3O14638 875 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 TSPAN4O14817 238 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 BDKRB1P46663 353 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 MLLT1Q03111 559 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 SLC3A1Q07837 685 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 CTC1Q2NKJ3 1217 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 CLEC12AQ5QGZ9 265 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 NANOGP8Q6NSW7 305 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 C12orf43Q96C57 262 aaKnown RBP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 OR4K3Q96R72 315 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 PBDC1Q9BVG4 233 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 HSD3B7Q9H2F3 369 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 NANOGQ9H9S0 305 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 GALPQ9UBC7 116 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 RGS9O75916 674 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 TIA1P31483 386 aaKnown RBP eCLIP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 RPS24P62847 133 aaKnown RBP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 COQ8AQ8NI60 647 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 NEIL3Q8TAT5 605 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 NSMAFQ92636 917 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 ISOC1Q96CN7 298 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 TCEAL4Q96EI5 215 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 ACOT13Q9NPJ3 140 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 MRPL42Q9Y6G3 142 aaKnown RBP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 DOT1LQ8TEK3 1739 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 MMP2P08253 660 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 DEFA5Q01523 94 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 PTCHD3Q3KNS1 767 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 RAB41Q5JT25 222 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 STEAP4Q687X5 459 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 CIR1Q86X95 450 aaPredicted RBP8.52□□□□□ -1.05
LSAMP-205ENST00000490035 SIX5Q8N196 739 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 DBF4BQ8NFT6 615 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 CD99L2Q8TCZ2 262 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 THAP4Q8WY91 577 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 ADAM7Q9H2U9 754 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 LDAHQ9H6V9 325 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 SRRDQ9UH36 339 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 SH2B3Q9UQQ2 575 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 SPEF1Q9Y4P9 236 aa8.52□□□□□ -1.05
LSAMP-205ENST00000490035 ITM2AO43736 263 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 CREBL2O60519 120 aaPredicted RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF806P0C7X5 589 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 RPS13P62277 151 aaKnown RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 RNASE12Q5GAN4 147 aaKnown RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SPIN3Q5JUX0 258 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 UBE2Q1Q7Z7E8 422 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 PHOSPHO1Q8TCT1 267 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 PYCR2Q96C36 320 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 CHIAQ9BZP6 476 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 TMEM168Q9H0V1 697 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 TOR3AQ9H497 397 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 FAM86C1Q9NVL1 165 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 A0A1W2PRU2 124 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 C9IYK1 514 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 C1GALT1C1LP0DN25 315 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 GJA9P57773 515 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 UFM1P61960 85 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 UGT3A2Q3SY77 523 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 ANKDD1AQ495B1 522 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SCGB2B2Q4G0G5 96 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 TECRLQ5HYJ1 363 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SYPL2Q5VXT5 272 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 TMEM135Q86UB9 458 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF598Q86UK7 904 aaKnown RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 DENND6BQ8NEG7 585 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF689Q96CS4 500 aaPredicted RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SIGLEC10Q96LC7 697 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 SYT3Q9BQG1 590 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 ARHGAP39Q9C0H5 1083 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 TAC3Q9UHF0 121 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 DKKL1Q9UK85 242 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 INSL5Q9Y5Q6 135 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 TEX13DA0A0J9YY54 714 aaPredicted RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 CENPMQ9NSP4 180 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 MAN2B1O00754 1011 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 MT-ND1P03886 318 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 JUNP05412 331 aaKnown RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 GALTP07902 379 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 HOXB2P14652 356 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 RBMXP38159 391 aaKnown RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 CLDN8P56748 225 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 NIPAL4Q0D2K0 466 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 C6orf136Q5SQH8 315 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 UGT2A3Q6UWM9 527 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 S100A7AQ86SG5 101 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 LRRC25Q8N386 305 aaPredicted RBP8.51□□□□□ -1.05
LSAMP-205ENST00000490035 DCBLD1Q8N8Z6 715 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 NANSQ9NR45 359 aa8.51□□□□□ -1.05
LSAMP-205ENST00000490035 EMC3Q9P0I2 261 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms