RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MT-ND1P03886 318 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 SKILP12757 684 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 RPL9P32969 192 aaKnown RBP3.95□□□□□ -1.78
CCDC39-206ENST00000489868 SCARB2Q14108 478 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 RNF212Q495C1 297 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 AGAP6Q5VW22 663 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 MSANTD1Q6ZTZ1 278 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 NUFIP2Q7Z417 695 aaKnown RBP3.95□□□□□ -1.78
CCDC39-206ENST00000489868 ZNF584Q8IVC4 421 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 AFAP1L1Q8TED9 768 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 SNRNP40Q96DI7 357 aaKnown RBP3.95□□□□□ -1.78
CCDC39-206ENST00000489868 ZNF274Q96GC6 653 aaPredicted RBP3.95□□□□□ -1.78
CCDC39-206ENST00000489868 CUEDC2Q9H467 287 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 MARCH7Q9H992 704 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 S100A14Q9HCY8 104 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 MED17Q9NVC6 651 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 CLEC5AQ9NY25 188 aa3.95□□□□□ -1.78
CCDC39-206ENST00000489868 M0R296 226 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 IGKV3-15P01624 115 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 FRKP42685 505 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-206ENST00000489868 FHITP49789 147 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 MEP1BQ16820 701 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 NHLRC3Q5JS37 347 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 ZNF506Q5JVG8 444 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 OTOAQ7RTW8 1153 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 C11orf53Q8IXP5 236 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 OR8H3Q8N146 312 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 GOT1L1Q8NHS2 421 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-206ENST00000489868 PCNPQ8WW12 178 aaKnown RBP3.94□□□□□ -1.78
CCDC39-206ENST00000489868 RUNDC3BQ96NL0 473 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 IDI2Q9BXS1 227 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 TMEM206Q9H813 350 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 VIPAS39Q9H9C1 493 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 NMUR1Q9HB89 426 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 ZNF319Q9P2F9 582 aa3.94□□□□□ -1.78
CCDC39-206ENST00000489868 TEX48A0A1B0GUV7 120 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 MAGEB16A2A368 324 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 A4D1N5 150 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 CENPBP07199 599 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-206ENST00000489868 FAM200BP0CF97 657 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 ID1P41134 155 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 SLC3A1Q07837 685 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 PCK2Q16822 640 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 RNLSQ5VYX0 342 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 GBP6Q6ZN66 633 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 TMUB2Q71RG4 321 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 HOOK3Q86VS8 718 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 CCDC71Q8IV32 467 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-206ENST00000489868 WDR49Q8IV35 697 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 KLHDC8AQ8IYD2 350 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 OR7G3Q8NG95 312 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 RBM24Q9BX46 236 aaKnown RBP3.93□□□□□ -1.78
CCDC39-206ENST00000489868 UBE2TQ9NPD8 197 aaPredicted RBP3.93□□□□□ -1.78
CCDC39-206ENST00000489868 ZNF446Q9NWS9 450 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 PSORS1C1Q9UIG5 152 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 GTF3C4Q9UKN8 822 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 FBXO7Q9Y3I1 522 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 CROCCQ5TZA2 2017 aa3.93□□□□□ -1.78
CCDC39-206ENST00000489868 ATP6AP2A0A1C7CYW4 349 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 SDR42E2A6NKP2 422 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 ATP9AO75110 1047 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 GH1P01241 217 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 LYNP07948 512 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 FHP07954 510 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 ARHGAP1Q07960 439 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 LCP2Q13094 533 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 FASTKQ14296 549 aaKnown RBP3.92□□□□□ -1.78
CCDC39-206ENST00000489868 FAM133BQ5BKY9 247 aaKnown RBP3.92□□□□□ -1.78
CCDC39-206ENST00000489868 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 RFWD3Q6PCD5 774 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 VITQ6UXI7 678 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 ZNF730Q6ZMV8 503 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 HIPK1Q86Z02 1210 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 ZNF781Q8N8C0 355 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 KLHL30-AS1Q8NEE0 82 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 OR6T1Q8NGN1 323 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 UBLCP1Q8WVY7 318 aaPredicted RBP3.92□□□□□ -1.78
CCDC39-206ENST00000489868 SPATA17Q96L03 361 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 RANBP9Q96S59 729 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 HSD17B14Q9BPX1 270 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 VPS18Q9P253 973 aa3.92□□□□□ -1.78
CCDC39-206ENST00000489868 SYT7O43581 403 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 ZNF253O75346 499 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 CSO75390 466 aaKnown RBP3.91□□□□□ -1.78
CCDC39-206ENST00000489868 GLCEO94923 617 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 DNAH10OSP0CZ25 163 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 ELK3P41970 407 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 SLC1A6P48664 564 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 MFGE8Q08431 387 aaPredicted RBP3.91□□□□□ -1.78
CCDC39-206ENST00000489868 ANKRD20A4Q4UJ75 823 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 ANKRD20A8PQ5CZ79 823 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 CCDC158Q5M9N0 1113 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 ANKRD20A2Q5SQ80 823 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 ANKRD20A1Q5TYW2 823 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 ANKRD20A3Q5VUR7 823 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 RALGAPA1Q6GYQ0 2036 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 CAPN13Q6MZZ7 669 aaPredicted RBP3.91□□□□□ -1.78
CCDC39-206ENST00000489868 ASPGQ86U10 573 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 LRRC49Q8IUZ0 686 aa3.91□□□□□ -1.78
CCDC39-206ENST00000489868 SIAH3Q8IW03 269 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms