RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FAM27E3Q08E93 113 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ZNF415Q09FC8 603 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 Q0VFX4 171 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 BST1Q10588 318 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 NEDD9Q14511 834 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ARHGAP19Q14CB8 494 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 KRT31Q15323 416 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 LRRC23Q53EV4 343 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SYT14P1Q58G82 188 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 PHYHD1Q5SRE7 291 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ARHGEF16Q5VV41 709 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 NADSYN1Q6IA69 706 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ASPHD2Q6ICH7 369 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 PYHIN1Q6K0P9 492 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 DUS1LQ6P1R4 473 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 METAP1DQ6UB28 335 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 BNIPLQ7Z465 357 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 WDR49Q8IV35 697 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 CROCCP3Q8IVE0 287 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 CERS5Q8N5B7 392 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SMYD1Q8NB12 490 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC38A9Q8NBW4 561 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ADAMTS14Q8WXS8 1223 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 TRIB2Q92519 343 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 FCGR1BQ92637 280 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 HAS2Q92819 552 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 P2RX5Q93086 422 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 RFT1Q96AA3 541 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 OXNAD1Q96HP4 312 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 RPGRIP1Q96KN7 1286 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ZNF570Q96NI8 536 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SEPHS2Q99611 448 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 CCDC3Q9BQI4 270 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 RTP3Q9BQQ7 232 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 MRPL13Q9BYD1 178 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 CLSTN2Q9H4D0 955 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 MAGIXQ9H6Y5 334 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 CATSPERBQ9H7T0 1116 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 VAT1LQ9HCJ6 419 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 HHATLQ9HCP6 504 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 ETNK2Q9NVF9 386 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 RAB20Q9NX57 234 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 DPP3Q9NY33 737 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 MALT1Q9UDY8 824 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 KCNJ14Q9UNX9 436 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 TNS3Q68CZ2 1445 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SLIT2O94813 1529 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 SF3B1O75533 1304 aaKnown RBP eCLIP2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 AFF2P51816 1311 aa2.94□□□□□ -1.94
DEPDC1-204ENST00000489862 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ILVBLA1L0T0 632 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 OR52A4PA6NMU1 304 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 WASHC1A8K0Z3 465 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 WASH3PC4AMC7 463 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM90A26D6RGX4 464 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PRRG1O14668 218 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ZNF264O43296 627 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 AKR7A2O43488 359 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SPRY3O43610 288 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 BUB1O43683 1085 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 GOT2P00505 430 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 STAG3L3P0CL85 134 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CHRNB2P17787 502 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ALDH1B1P30837 517 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 OTX2P32243 289 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 TNFSF8P32971 234 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SSR1P43307 286 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PPP3CCP48454 512 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC11A1P49279 550 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PDLIM4P50479 330 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CAMK4Q16566 473 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PHLDA2Q53GA4 152 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 CMPK2Q5EBM0 449 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 PAPPA-AS1Q5QFB9 102 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FNBP1LQ5T0N5 605 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 GRTP1Q5TC63 336 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 AGAP6Q5VW22 663 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 C18orf63Q68DL7 685 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 AAGABQ6PD74 315 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 WASH2PQ6VEQ5 465 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 RAD9BQ6WBX8 426 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 TPRG1Q6ZUI0 275 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 IL17RELQ6ZVW7 336 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 LRRC70Q7Z2Q7 622 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM228AQ86W67 206 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 ANKRD46Q86W74 232 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 NR2C2APQ86WQ0 139 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MISPQ8IVT2 679 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 C4orf19Q8IY42 314 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 MB21D2Q8IYB1 491 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 BBOF1Q8ND07 529 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 GPRC5AQ8NFJ5 357 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 OR9A1PQ8NGU1 263 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SSMEM1Q8WWF3 244 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 STARD8Q92502 1023 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 GGHQ92820 318 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 KIAA1143Q96AT1 154 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC41A3Q96GZ6 507 aa2.93□□□□□ -1.94
DEPDC1-204ENST00000489862 BTBD9Q96Q07 612 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms