RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 C15orf38-AP3S2A0A0A6YYH1 394 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 C4orf47A7E2U8 309 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 SGK494L7N484 410 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 RFXANKO14593 260 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 DNAJB6O75190 326 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 PRKRAO75569 313 aaKnown RBP19.75■□□□□ 0.75
SND1-214ENST00000489417 PDE5AO76074 875 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 EFNA1P20827 205 aaPredicted RBP19.75■□□□□ 0.75
SND1-214ENST00000489417 CPN2P22792 545 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 SLC6A2P23975 617 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 BUD31P41223 144 aaPredicted RBP19.75■□□□□ 0.75
SND1-214ENST00000489417 SLC7A2P52569 658 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 ITGA1P56199 1179 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 TNFRSF17Q02223 184 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 ACY1Q03154 408 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 COL9A2Q14055 689 aaPredicted RBP19.75■□□□□ 0.75
SND1-214ENST00000489417 PGM2L1Q6PCE3 622 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 ARPINQ7Z6K5 226 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 KIAA2013Q8IYS2 634 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 GPR135Q8IZ08 494 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 CA13Q8N1Q1 262 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 RCBTB1Q8NDN9 531 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 DNAJB14Q8TBM8 379 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 UCN3Q969E3 161 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 EXOSC8Q96B26 276 aaKnown RBP19.75■□□□□ 0.75
SND1-214ENST00000489417 ZNF501Q96CX3 271 aaPredicted RBP19.75■□□□□ 0.75
SND1-214ENST00000489417 PANX1Q96RD7 426 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 FGF21Q9NSA1 209 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 MS4A12Q9NXJ0 267 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 TAS2R7Q9NYW3 318 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 C5AR2Q9P296 337 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 TMEM181Q9P2C4 612 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 SERTAD3Q9UJW9 196 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 SPACA6W5XKT8 324 aa19.75■□□□□ 0.75
SND1-214ENST00000489417 ASXL3Q9C0F0 2248 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 TRBV5-3A0A0A0MS03 114 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 A0A0A6YYC8 382 aaPredicted RBP19.74■□□□□ 0.75
SND1-214ENST00000489417 I3L1I5 382 aaPredicted RBP19.74■□□□□ 0.75
SND1-214ENST00000489417 PDPK1O15530 556 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 FOXS1O43638 330 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 CBFA2T3O75081 653 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 RDH16O75452 317 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 NSA2O95478 260 aaKnown RBP19.74■□□□□ 0.75
SND1-214ENST00000489417 ANP32DO95626 131 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 CPSF4O95639 269 aaKnown RBP19.74■□□□□ 0.75
SND1-214ENST00000489417 TGM1P22735 817 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 CDKN2CP42773 168 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 TRA2AQ13595 282 aaKnown RBP eCLIP19.74■□□□□ 0.75
SND1-214ENST00000489417 FAM214AQ32MH5 1076 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 PHF19Q5T6S3 580 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 TLDC1Q6P9B6 456 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 MSRB3Q8IXL7 192 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 FBXW8Q8N3Y1 598 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 OR5T3Q8NGG3 340 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 TMEM125Q96AQ2 219 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 CDC6Q99741 560 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 SLC25A37Q9NYZ2 338 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 VAPAQ9P0L0 249 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 ABCD2Q9UBJ2 740 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.74■□□□□ 0.75
SND1-214ENST00000489417 PACSIN3Q9UKS6 424 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 NEUROG3Q9Y4Z2 214 aa19.74■□□□□ 0.75
SND1-214ENST00000489417 WDFY4Q6ZS81 3184 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 A0A1W2PRB8 838 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 GLOD5A6NK44 160 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 H0YHG0 523 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 PGRMC2O15173 223 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 GSNP06396 782 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 HOXB9P17482 250 aaPredicted RBP19.73■□□□□ 0.75
SND1-214ENST00000489417 PTPN6P29350 595 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 TLX1P31314 330 aaPredicted RBP19.73■□□□□ 0.75
SND1-214ENST00000489417 CEACAM7Q14002 265 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 GTDC1Q4AE62 458 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 PIGGQ5H8A4 983 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 SAMD4BQ5PRF9 694 aaKnown RBP19.73■□□□□ 0.75
SND1-214ENST00000489417 NANOGP8Q6NSW7 305 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 SLC48A1Q6P1K1 146 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 SLC15A3Q8IY34 581 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 FAM13CQ8NE31 585 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 OR4A15Q8NGL6 344 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 ANKRD27Q96NW4 1050 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 GBP5Q96PP8 586 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 CSF3RQ99062 836 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 NANOGQ9H9S0 305 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 CUTCQ9NTM9 273 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 CMTM6Q9NX76 183 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 UTS2RQ9UKP6 389 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 CES1P1Q9UKY3 287 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 PCDHB14Q9Y5E9 798 aa19.73■□□□□ 0.75
SND1-214ENST00000489417 NME4O00746 187 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 CIB2O75838 187 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 C6orf47O95873 294 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 GCGRP47871 477 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 AVPR1BP47901 424 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 RAB38P57729 211 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 ZFP36L1Q07352 338 aaKnown RBP19.72■□□□□ 0.75
SND1-214ENST00000489417 RUNDC3AQ59EK9 446 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 YOD1Q5VVQ6 348 aaPredicted RBP19.72■□□□□ 0.75
SND1-214ENST00000489417 DTWD1Q8N5C7 304 aa19.72■□□□□ 0.75
SND1-214ENST00000489417 OR8J3Q8NGG0 315 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms