RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 SLC44A1Q8WWI5 657 aa11.7□□□□□ -0.54
SRRM1-216ENST00000489130 TMEM125Q96AQ2 219 aa11.7□□□□□ -0.54
SRRM1-216ENST00000489130 CMTM7Q96FZ5 175 aa11.7□□□□□ -0.54
SRRM1-216ENST00000489130 MAPKAP1Q9BPZ7 522 aa11.7□□□□□ -0.54
SRRM1-216ENST00000489130 CDC42EP4Q9H3Q1 356 aaKnown RBP11.7□□□□□ -0.54
SRRM1-216ENST00000489130 DMRT3Q9NQL9 472 aa11.7□□□□□ -0.54
SRRM1-216ENST00000489130 VTI1BQ9UEU0 232 aa11.7□□□□□ -0.54
SRRM1-216ENST00000489130 FBXW2Q9UKT8 454 aa11.7□□□□□ -0.54
SRRM1-216ENST00000489130 TMEM200CA6NKL6 621 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 H0YIV9 168 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 PRKNO60260 465 aaPredicted RBP11.69□□□□□ -0.54
SRRM1-216ENST00000489130 UGDHO60701 494 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 ZFAND5O76080 213 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 ACSL3O95573 720 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 ECHS1P30084 290 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 SSR2P43308 183 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 ARFIP1P53367 373 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 STX4Q12846 297 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 SERTAD2Q14140 314 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 AP5B1Q2VPB7 878 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 TECRLQ5HYJ1 363 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 DEPDC1Q5TB30 811 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 CPSF7Q8N684 471 aaKnown RBP11.69□□□□□ -0.54
SRRM1-216ENST00000489130 MNS1Q8NEH6 495 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 OR14A16Q8NHC5 309 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 PTPMT1Q8WUK0 201 aaPredicted RBP11.69□□□□□ -0.54
SRRM1-216ENST00000489130 DAZLQ92904 295 aaKnown RBP11.69□□□□□ -0.54
SRRM1-216ENST00000489130 CCDC120Q96HB5 630 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 FMO2Q99518 471 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 CCDC77Q9BR77 488 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 ALOXE3Q9BYJ1 711 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 OR51B5Q9H339 312 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 ACTR8Q9H981 624 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 ZNF835Q9Y2P0 537 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 ANGPTL3Q9Y5C1 460 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 TNPO3Q9Y5L0 923 aaKnown RBP11.69□□□□□ -0.54
SRRM1-216ENST00000489130 CLCA3PQ9Y6N3 262 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 SPACA6W5XKT8 324 aa11.69□□□□□ -0.54
SRRM1-216ENST00000489130 SVILO95425 2214 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 ZGRF1Q86YA3 2104 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 LRRC14BA6NHZ5 514 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 NPIPA5E9PKD4 350 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 SAP18O00422 153 aaKnown RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 ASNA1O43681 348 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 LDB3O75112 727 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 SH3BGRLO75368 114 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 IFNA16P05015 189 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 INHBAP08476 426 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 ZNF24P17028 368 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 PIK3CGP48736 1102 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 SSR4P51571 173 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 GLE1Q53GS7 698 aaKnown RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 OR4C11Q6IEV9 310 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 MTFR2Q6P444 385 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 Q6ZPB1 254 aaPredicted RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 GOLGA7Q7Z5G4 137 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 MYLK4Q86YV6 388 aaPredicted RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 CYP4Z2PQ8N1L4 340 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 PLD6Q8N2A8 252 aaKnown RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 ZCCHC7Q8N3Z6 543 aaKnown RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 RNF175Q8N4F7 328 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 TMEM156Q8N614 296 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 POGLUT1Q8NBL1 392 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 MORN4Q8NDC4 146 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 C7orf57Q8NEG2 295 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 OR8K3Q8NH51 312 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 ITLN2Q8WWU7 325 aaPredicted RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 ZNF592Q92610 1267 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 ANKRD9Q96BM1 317 aaPredicted RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 REPS1Q96D71 796 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 PAFAH2Q99487 392 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 CENPKQ9BS16 269 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 SORBS1Q9BX66 1292 aaKnown RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 TSPAN10Q9H1Z9 355 aaPredicted RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 VPS11Q9H270 941 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 MS4A12Q9NXJ0 267 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 MYOTQ9UBF9 498 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 SUCOQ9UBS9 1254 aaKnown RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 NPIPA1Q9UND3 350 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 KLF13Q9Y2Y9 288 aaPredicted RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 YARS2Q9Y2Z4 477 aaKnown RBP11.68□□□□□ -0.54
SRRM1-216ENST00000489130 PCDHGA11Q9Y5H2 935 aa11.68□□□□□ -0.54
SRRM1-216ENST00000489130 CCL21O00585 134 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 PLPP1O14494 284 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 OR2J2O76002 312 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 SIX3O95343 332 aaPredicted RBP11.67□□□□□ -0.54
SRRM1-216ENST00000489130 TUBB4AP04350 444 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 CTAGE8P0CG41 777 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 CPN2P22792 545 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 SERPINB9P50453 376 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 RAP1GDS1P52306 607 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 CASP6P55212 293 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 RPS13P62277 151 aaKnown RBP11.67□□□□□ -0.54
SRRM1-216ENST00000489130 PHEXP78562 749 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 IGLV3-21P80748 117 aaPredicted RBP11.67□□□□□ -0.54
SRRM1-216ENST00000489130 SLAMF1Q13291 335 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 DDX39BQ13838 428 aaKnown RBP11.67□□□□□ -0.54
SRRM1-216ENST00000489130 GTF2H2Q13888 395 aa11.67□□□□□ -0.54
SRRM1-216ENST00000489130 C3AR1Q16581 482 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms