RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 NBPF19A0A087WUL8 3843 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 TRBV11-1A0A0K0K1C0 115 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 OR7A17O14581 309 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 RIPK2O43353 540 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 UGDHO60701 494 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 NEURL1O76050 574 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 LDLRP01130 860 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 SNRPAP09012 282 aaKnown RBP23.32■■□□□ 1.32
HMGN1-217ENST00000489072 MYBL2P10244 700 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 PIK3CGP48736 1102 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 RPS13P62277 151 aaKnown RBP23.32■■□□□ 1.32
HMGN1-217ENST00000489072 OC90Q02509 493 aaPredicted RBP23.32■■□□□ 1.32
HMGN1-217ENST00000489072 CPSF6Q16630 551 aaKnown RBP eCLIP23.32■■□□□ 1.32
HMGN1-217ENST00000489072 OR4C11Q6IEV9 310 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 TRMT10CQ7L0Y3 403 aaKnown RBP23.32■■□□□ 1.32
HMGN1-217ENST00000489072 ARMC10Q8N2F6 343 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 NCLNQ969V3 563 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 SCMH1Q96GD3 660 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 NSUN5Q96P11 429 aaKnown RBP23.32■■□□□ 1.32
HMGN1-217ENST00000489072 DEFB126Q9BYW3 111 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 TXLNGYQ9BZA5 131 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 NOL11Q9H8H0 719 aaKnown RBP23.32■■□□□ 1.32
HMGN1-217ENST00000489072 ADAP2Q9NPF8 381 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 PCTPQ9UKL6 214 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 FBXW2Q9UKT8 454 aa23.32■■□□□ 1.32
HMGN1-217ENST00000489072 WIPF3A6NGB9 483 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 PLPP1O14494 284 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 LDB3O75112 727 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 SBK3P0C264 359 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 CLCN2P51788 898 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 ZNF227Q86WZ6 799 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 OR52B6Q8NGF0 335 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 DNAJB8Q8NHS0 232 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 WDR20Q8TBZ3 569 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 THAP3Q8WTV1 239 aaPredicted RBP23.31■■□□□ 1.32
HMGN1-217ENST00000489072 RGMAQ96B86 450 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 CDK15Q96Q40 435 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 ALOXE3Q9BYJ1 711 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 ZBTB26Q9HCK0 441 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 LRFN1Q9P244 771 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 TMCO1Q9UM00 188 aa23.31■■□□□ 1.32
HMGN1-217ENST00000489072 STX16-NPEPL1H3BU86 382 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 STX16O14662 325 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 WISP2O76076 250 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 ETHE1O95571 254 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 DDAH2O95865 285 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 CRYABP02511 175 aaKnown RBP23.3■■□□□ 1.32
HMGN1-217ENST00000489072 NEK2P51955 445 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 RAP1GDS1P52306 607 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 KCNK10P57789 538 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 SLAMF1Q13291 335 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 ZRSR2Q15696 482 aaKnown RBP23.3■■□□□ 1.32
HMGN1-217ENST00000489072 ELAVL1Q15717 326 aaKnown RBP23.3■■□□□ 1.32
HMGN1-217ENST00000489072 ADGRD1Q6QNK2 874 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 GSPT2Q8IYD1 628 aaKnown RBP23.3■■□□□ 1.32
HMGN1-217ENST00000489072 TMEM151AQ8N4L1 468 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 VMP1Q96GC9 406 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 MRPL57Q9BQC6 102 aaKnown RBP23.3■■□□□ 1.32
HMGN1-217ENST00000489072 ZNF717Q9BY31 904 aaPredicted RBP23.3■■□□□ 1.32
HMGN1-217ENST00000489072 EPB41L4BQ9H329 900 aa23.3■■□□□ 1.32
HMGN1-217ENST00000489072 PRKNO60260 465 aaPredicted RBP23.29■■□□□ 1.32
HMGN1-217ENST00000489072 SMIM24O75264 130 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 CLDN9O95484 217 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 IFNA16P05015 189 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 CD46P15529 392 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 CPN2P22792 545 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 TRHRP34981 398 aaPredicted RBP23.29■■□□□ 1.32
HMGN1-217ENST00000489072 ID2Q02363 134 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 STX4Q12846 297 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 TRAF3Q13114 568 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 TIFABQ6ZNK6 161 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 RPS27LQ71UM5 84 aaKnown RBP23.29■■□□□ 1.32
HMGN1-217ENST00000489072 PTPMT1Q8WUK0 201 aaPredicted RBP23.29■■□□□ 1.32
HMGN1-217ENST00000489072 ANKRD9Q96BM1 317 aaPredicted RBP23.29■■□□□ 1.32
HMGN1-217ENST00000489072 REPS1Q96D71 796 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 C5orf34Q96MH7 638 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 MRPL46Q9H2W6 279 aaKnown RBP23.29■■□□□ 1.32
HMGN1-217ENST00000489072 TRIM45Q9H8W5 580 aaPredicted RBP23.29■■□□□ 1.32
HMGN1-217ENST00000489072 VTI1BQ9UEU0 232 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 MYO7BQ6PIF6 2116 aa23.29■■□□□ 1.32
HMGN1-217ENST00000489072 UNC79Q9P2D8 2635 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 CDK2AP1O14519 115 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 SP1P08047 785 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 PTX3P26022 381 aaPredicted RBP23.28■■□□□ 1.32
HMGN1-217ENST00000489072 CCNG1P51959 295 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 C4orf17Q53FE4 359 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 SLC25A25Q6KCM7 469 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 GALNTL5Q7Z4T8 443 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 TMEM132CQ8N3T6 1108 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 ZCCHC7Q8N3Z6 543 aaKnown RBP23.28■■□□□ 1.32
HMGN1-217ENST00000489072 HORMAD2Q8N7B1 307 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 ATP6V1E2Q96A05 226 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 NTMT1Q9BV86 223 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 PLEKHB1Q9UF11 243 aaPredicted RBP23.28■■□□□ 1.32
HMGN1-217ENST00000489072 SPACA6W5XKT8 324 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 CENPEQ02224 2701 aa23.28■■□□□ 1.32
HMGN1-217ENST00000489072 CROCCQ5TZA2 2017 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 ASPDHA6ND91 283 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 SYNDIG1LA6NDD5 238 aa23.27■■□□□ 1.32
HMGN1-217ENST00000489072 TMEM200CA6NKL6 621 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms