RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 GALNT11Q8NCW6 608 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 MYRIPQ8NFW9 859 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 WDR20Q8TBZ3 569 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 EPS8L3Q8TE67 593 aaKnown RBP13.38□□□□□ -0.27
BRCA1-218ENST00000489037 TRPC4APQ8TEL6 797 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 MZB1Q8WU39 189 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 MAPKAP1Q9BPZ7 522 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 DEFB126Q9BYW3 111 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 RNF32Q9H0A6 362 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 WDR41Q9HAD4 459 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 ZBTB26Q9HCK0 441 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 NMRK1Q9NWW6 199 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 LYARQ9NX58 379 aaKnown RBP13.38□□□□□ -0.27
BRCA1-218ENST00000489037 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 PPT2Q9UMR5 302 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 MYO18BQ8IUG5 2567 aa13.38□□□□□ -0.27
BRCA1-218ENST00000489037 CROCCQ5TZA2 2017 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 ARHGAP10A1A4S6 786 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 CCDC151A5D8V7 595 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 OR5H15A6NDH6 313 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 PLPP1O14494 284 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 COPEO14579 308 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 DLX3O60479 287 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 MYO1DO94832 1006 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 WDPCPO95876 746 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 PPP2R1BP30154 601 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 BUD31P41223 144 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-218ENST00000489037 CLCN2P51788 898 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 PRKAA2P54646 552 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 NAA20P61599 178 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 TRAF3Q13114 568 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 BIKQ13323 160 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 TERF2Q15554 542 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 SGO1Q5FBB7 561 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 ACER2Q5QJU3 275 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 FCRLBQ6BAA4 426 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 PAGE2Q7Z2X7 111 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 CLNKQ7Z7G1 428 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 GPR180Q86V85 440 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 NUDT13Q86X67 352 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 ZCCHC7Q8N3Z6 543 aaKnown RBP13.37□□□□□ -0.27
BRCA1-218ENST00000489037 HORMAD2Q8N7B1 307 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 CATSPER1Q8NEC5 780 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 SELENOMQ8WWX9 145 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 DAZLQ92904 295 aaKnown RBP13.37□□□□□ -0.27
BRCA1-218ENST00000489037 SNRNP40Q96DI7 357 aaKnown RBP13.37□□□□□ -0.27
BRCA1-218ENST00000489037 CSF3RQ99062 836 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
BRCA1-218ENST00000489037 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 IQCGQ9H095 443 aaKnown RBP13.37□□□□□ -0.27
BRCA1-218ENST00000489037 ADAP2Q9NPF8 381 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRCA1-218ENST00000489037 TRPS1Q9UHF7 1281 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 MID2Q9UJV3 735 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 PCDHGA10Q9Y5H3 936 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 CSAG2Q9Y5P2 127 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 CLCA3PQ9Y6N3 262 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
BRCA1-218ENST00000489037 ZGRF1Q86YA3 2104 aa13.37□□□□□ -0.27
BRCA1-218ENST00000489037 CDK2AP1O14519 115 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 DYRK3O43781 588 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 SEMA3DO95025 777 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 F10P00742 488 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 KRT6AP02538 564 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 KRT6BP04259 564 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 COX7A2P14406 83 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 TSPAN8P19075 237 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 HMOX2P30519 316 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 CRHR1P34998 444 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 KRT6CP48668 564 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 TNFSF10P50591 281 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 HNRNPFP52597 415 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 ELOAQ14241 798 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 ELAVL1Q15717 326 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 UNC50Q53HI1 259 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 CFAP157Q5JU67 520 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 RPUSD3Q6P087 351 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 GPRIN3Q6ZVF9 776 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 RPS27LQ71UM5 84 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 RPS19BP1Q86WX3 136 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 CRLF3Q8IUI8 442 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 LGI4Q8N135 537 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 BEST3Q8N1M1 668 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 TMEM52Q8NDY8 209 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 B3GNT7Q8NFL0 401 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 ELP5Q8TE02 316 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 TANKQ92844 425 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 VMP1Q96GC9 406 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 TMEM237Q96Q45 408 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 SORBS1Q9BX66 1292 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 CDCP1Q9H5V8 836 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 RPF2Q9H7B2 306 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 DDX31Q9H8H2 851 aaKnown RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
BRCA1-218ENST00000489037 ASF1BQ9NVP2 202 aa13.36□□□□□ -0.27
BRCA1-218ENST00000489037 FCHO1O14526 889 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 LDB3O75112 727 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 GUCY1B2O75343 617 aa13.35□□□□□ -0.27
BRCA1-218ENST00000489037 OR4F21O95013 312 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms