RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 UCN3Q969E3 161 aa14.25□□□□□ -0.13
FDPS-213ENST00000489003 APIPQ96GX9 242 aa14.25□□□□□ -0.13
FDPS-213ENST00000489003 FER1L6-AS2Q96M78 137 aa14.25□□□□□ -0.13
FDPS-213ENST00000489003 ING2Q9H160 280 aa14.25□□□□□ -0.13
FDPS-213ENST00000489003 NECTIN3Q9NQS3 549 aa14.25□□□□□ -0.13
FDPS-213ENST00000489003 PRDM9Q9NQV7 894 aa14.25□□□□□ -0.13
FDPS-213ENST00000489003 MMACHCQ9Y4U1 282 aa14.25□□□□□ -0.13
FDPS-213ENST00000489003 CLDN16Q9Y5I7 305 aa14.25□□□□□ -0.13
FDPS-213ENST00000489003 DOCK10Q96BY6 2186 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 IGHV3-20A0A0C4DH32 117 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 A0A1W2PQ72 361 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 WASHC1A8K0Z3 465 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 CLDN4O14493 209 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 PCDH17O14917 1159 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 HSPA4LO95757 839 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 COX6A1P12074 109 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 ACPPP15309 386 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 CCL11P51671 97 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 HSD17B7P56937 341 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 RAE1P78406 368 aaKnown RBP14.24□□□□□ -0.13
FDPS-213ENST00000489003 EEF1A2Q05639 463 aaKnown RBP14.24□□□□□ -0.13
FDPS-213ENST00000489003 BST1Q10588 318 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 SH2D4BQ5SQS7 431 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 C18orf63Q68DL7 685 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 PCSK4Q6UW60 755 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 RNF165Q6ZSG1 346 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 LANCL3Q6ZV70 420 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 NDUFAF7Q7L592 441 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 PAGE2Q7Z2X7 111 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 COMMD6Q7Z4G1 85 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 SCUBE1Q8IWY4 988 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 HOMEZQ8IX15 550 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 ZNF595Q8IYB9 648 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 EXD3Q8N9H8 876 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 FAM47BQ8NA70 645 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 TM4SF18Q96CE8 201 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 VPS50Q96JG6 964 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 SORT1Q99523 831 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 WDR77Q9BQA1 342 aaPredicted RBP14.24□□□□□ -0.13
FDPS-213ENST00000489003 ATP13A2Q9NQ11 1180 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 LYARQ9NX58 379 aaKnown RBP14.24□□□□□ -0.13
FDPS-213ENST00000489003 SIRT5Q9NXA8 310 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 MS4A12Q9NXJ0 267 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 FBXL4Q9UKA2 621 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.24□□□□□ -0.13
FDPS-213ENST00000489003 PTGDR2Q9Y5Y4 395 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 SPACA6W5XKT8 324 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 LOC400499M0QZD8 3231 aa14.24□□□□□ -0.13
FDPS-213ENST00000489003 IGKV3D-11A0A0A0MRZ8 115 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 IGHV1-45A0A0A0MS14 117 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 TGFBR3LH3BV60 316 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 SLC28A1O00337 649 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 DNAJB5O75953 348 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 HPP00738 406 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 LINC00032P0C843 101 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 MAOAP21397 527 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 RRADP55042 308 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 ACTN3Q08043 901 aaPredicted RBP14.23□□□□□ -0.13
FDPS-213ENST00000489003 PCOLCEQ15113 449 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 PARP9Q8IXQ6 854 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 EFCAB3Q8N7B9 438 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 ZNF781Q8N8C0 355 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 AGR3Q8TD06 166 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 C11orf24Q96F05 449 aaPredicted RBP14.23□□□□□ -0.13
FDPS-213ENST00000489003 IMMP1LQ96LU5 166 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 ARHGAP9Q9BRR9 750 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 ILKAPQ9H0C8 392 aaPredicted RBP14.23□□□□□ -0.13
FDPS-213ENST00000489003 ZNF700Q9H0M5 742 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 RPF2Q9H7B2 306 aaKnown RBP14.23□□□□□ -0.13
FDPS-213ENST00000489003 MANSC1Q9H8J5 431 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 PHF11Q9UIL8 331 aa14.23□□□□□ -0.13
FDPS-213ENST00000489003 MRPS33Q9Y291 106 aaKnown RBP14.23□□□□□ -0.13
FDPS-213ENST00000489003 CROCCQ5TZA2 2017 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 NSG1A0A0A6YYJ2 146 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 TCRBV16S1A1N1A0A5B0 115 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 ARHGAP10A1A4S6 786 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 BLACEA4D250 179 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 NPIPB8E9PQR5 432 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 ERVH48-1M5A8F1 160 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 RGS14O43566 566 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 PRKRAO75569 313 aaKnown RBP14.22□□□□□ -0.13
FDPS-213ENST00000489003 CHEK2O96017 543 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 PRPH2P23942 346 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 TLX1P31314 330 aaPredicted RBP14.22□□□□□ -0.13
FDPS-213ENST00000489003 MAPK12P53778 367 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 POLE2P56282 527 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 SOX8P57073 446 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 OR4D2P58180 307 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 PPP2R2AP63151 447 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 TNFRSF17Q02223 184 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 ACSM2AQ08AH3 577 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 Q0VFX4 171 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 SLC13A2Q13183 592 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 KIAA0040Q15053 153 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 IMPG1Q17R60 797 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 SFT2D3Q587I9 215 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 SPDYAQ5MJ70 313 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 ACSM2BQ68CK6 577 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 GALNT18Q6P9A2 607 aa14.22□□□□□ -0.13
FDPS-213ENST00000489003 CLNKQ7Z7G1 428 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms