RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 HK2P52789 917 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 PPIAP62937 165 aaKnown RBP17.09■□□□□ 0.33
HDAC6-231ENST00000488905 PLGLB1Q02325 96 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 TGM3Q08188 693 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 STX4Q12846 297 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 DOC2AQ14183 400 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 EFTUD2Q15029 972 aaKnown RBP eCLIP17.09■□□□□ 0.336e-9■■■■□ 19.9
HDAC6-231ENST00000488905 PDK4Q16654 411 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 PAOXQ6QHF9 649 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 CAPN12Q6ZSI9 719 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 GPSM1Q86YR5 675 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 CREG2Q8IUH2 290 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 ZBED8Q8IZ13 594 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 SPATA6LQ8N4H0 392 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 SNX31Q8N9S9 440 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 MORN4Q8NDC4 146 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 PTPMT1Q8WUK0 201 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-231ENST00000488905 SREK1Q8WXA9 508 aaKnown RBP17.09■□□□□ 0.33
HDAC6-231ENST00000488905 WDR34Q96EX3 536 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 TSPAN17Q96FV3 270 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 KCNC2Q96PR1 638 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 EFCAB11Q9BUY7 163 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 TTTY12Q9BZ98 90 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 DEFB127Q9H1M4 99 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 CAB39LQ9H9S4 337 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 VTI1BQ9UEU0 232 aa17.09■□□□□ 0.33
HDAC6-231ENST00000488905 ZNF490Q9ULM2 529 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-231ENST00000488905 MTO1Q9Y2Z2 717 aaKnown RBP17.09■□□□□ 0.33
HDAC6-231ENST00000488905 MYOCOSA0A1B0GUC4 107 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 EFCAB8A8MWE9 144 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 PHGDHO43175 533 aaKnown RBP17.08■□□□□ 0.32
HDAC6-231ENST00000488905 CTNSO60931 367 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 STK16O75716 305 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 CD1DP15813 335 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 MSX1P28360 303 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 OR4D1Q15615 310 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 CDKL4Q5MAI5 379 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 SULT1C3Q6IMI6 304 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 RGS9BPQ6ZS82 235 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 GK5Q6ZS86 529 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 SLC22A16Q86VW1 577 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 ZNF321PQ8N8H1 164 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 PDPRQ8NCN5 879 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 LILRB4Q8NHJ6 448 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 KIAA1191Q96A73 305 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 ESAMQ96AP7 390 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 F2RL3Q96RI0 385 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 ALOXE3Q9BYJ1 711 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 OR8D2Q9GZM6 311 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 LYRM4Q9HD34 91 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 PRDM7Q9NQW5 492 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 FREM3P0C091 2139 aa17.08■□□□□ 0.32
HDAC6-231ENST00000488905 FOXO6A8MYZ6 492 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 C17orf105B2RV13 164 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 NPIPA2E9PIF3 369 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 NPIPA3F8WFD2 350 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 G3V3Y1 287 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 CCDC188H7C350 402 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 LDB3O75112 727 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 GLSO94925 669 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-231ENST00000488905 CCDC166P0CW27 439 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 RPL21P46778 160 aaKnown RBP17.07■□□□□ 0.32
HDAC6-231ENST00000488905 NUP107P57740 925 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 ATP6V0D1P61421 351 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 CBLBQ13191 982 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 SERTAD2Q14140 314 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 PAGE2BQ5JRK9 111 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 NDUFAF5Q5TEU4 345 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 SPNS3Q6ZMD2 512 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 ZNF793Q6ZN11 406 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 RTL4Q6ZR62 310 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 GOLM1Q8NBJ4 401 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 OR5M3Q8NGP4 307 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 OR8K3Q8NH51 312 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 SLC2A12Q8TD20 617 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 SCYL1Q96KG9 808 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 GPR22Q99680 433 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 FAM173AQ9BQD7 235 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 UCK2Q9BZX2 261 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 ROGDIQ9GZN7 287 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 KCNF1Q9H3M0 494 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 TXNDC16Q9P2K2 825 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 LIPGQ9Y5X9 500 aa17.07■□□□□ 0.32
HDAC6-231ENST00000488905 ANKHD1Q8IWZ3 2542 aaKnown RBP17.07■□□□□ 0.32
HDAC6-231ENST00000488905 NF1P21359 2839 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 NINQ8N4C6 2090 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 AKAP6Q13023 2319 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 OR14I1A6ND48 311 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 CXorf49A8MYA2 514 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-231ENST00000488905 TOXO94900 526 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 IGHG3P01860 377 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 EPORP19235 508 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 RNF4P78317 190 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 PMPCAQ10713 525 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 LAPTM5Q13571 262 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 ZNF750Q32MQ0 723 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 ACAD11Q709F0 780 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 UBE3DQ7Z6J8 389 aa17.06■□□□□ 0.32
HDAC6-231ENST00000488905 CCDC71Q8IV32 467 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-231ENST00000488905 FAM109AQ8N4B1 249 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms