RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 MFAP5Q13361 173 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 SERTAD2Q14140 314 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 TERF2Q15554 542 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 LIPMQ5VYY2 423 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 LETMD1Q6P1Q0 360 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 LINC00696Q6ZRV3 163 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 RPS27LQ71UM5 84 aaKnown RBP12.1□□□□□ -0.47
PHF1-210ENST00000488767 UBE3DQ7Z6J8 389 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 GPR180Q86V85 440 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 SIRT6Q8N6T7 355 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 SUN3Q8TAQ9 357 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 PNPLA2Q96AD5 504 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 IMMP1LQ96LU5 166 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 WDR77Q9BQA1 342 aaPredicted RBP12.1□□□□□ -0.47
PHF1-210ENST00000488767 MESP1Q9BRJ9 268 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 MFRPQ9BY79 579 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 CENPHQ9H3R5 247 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 BRF2Q9HAW0 419 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 KCNK13Q9HB14 408 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 MID1IP1Q9NPA3 183 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 PNO1Q9NRX1 252 aaKnown RBP12.1□□□□□ -0.47
PHF1-210ENST00000488767 ADAM29Q9UKF5 820 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 EMCNQ9ULC0 261 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 SCN3AQ9NY46 2000 aa12.1□□□□□ -0.47
PHF1-210ENST00000488767 NUP210LQ5VU65 1888 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 GOLGA6L10A6NI86 522 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 SAGE2PA6NJ88 616 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 G3V2L1 256 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 J3QKU1 62 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 CYR61O00622 381 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 OR4F21O95013 312 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 ESRRBO95718 433 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 HSD3B1P14060 373 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 TNNI3P19429 210 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 HSD3B2P26439 372 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 SLC26A5P58743 744 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 CSTF3Q12996 717 aaKnown RBP12.09□□□□□ -0.47
PHF1-210ENST00000488767 TNFAIP8L3Q5GJ75 292 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 ZNF793Q6ZN11 406 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 CLNKQ7Z7G1 428 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 SCUBE1Q8IWY4 988 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 TMEM132CQ8N3T6 1108 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 RNF175Q8N4F7 328 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 GBP7Q8N8V2 638 aaPredicted RBP12.09□□□□□ -0.47
PHF1-210ENST00000488767 BANPQ8N9N5 519 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 DNAJB14Q8TBM8 379 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 TANKQ92844 425 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 DAZLQ92904 295 aaKnown RBP12.09□□□□□ -0.47
PHF1-210ENST00000488767 CNDP1Q96KN2 507 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 ZNF354BQ96LW1 612 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 MAPKAP1Q9BPZ7 522 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 TRMOQ9BU70 441 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 RPF2Q9H7B2 306 aaKnown RBP12.09□□□□□ -0.47
PHF1-210ENST00000488767 DDX31Q9H8H2 851 aaKnown RBP12.09□□□□□ -0.47
PHF1-210ENST00000488767 SSU72Q9NP77 194 aaKnown RBP12.09□□□□□ -0.47
PHF1-210ENST00000488767 MMP25Q9NPA2 562 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 ADAP2Q9NPF8 381 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 NECTIN3Q9NQS3 549 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 OXSMQ9NWU1 459 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 MAP10Q9P2G4 905 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 PLLPQ9Y342 182 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 CLCA3PQ9Y6N3 262 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 CCDC88CQ9P219 2028 aa12.09□□□□□ -0.47
PHF1-210ENST00000488767 IGKV3D-11A0A0A0MRZ8 115 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 MANBAO00462 879 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
PHF1-210ENST00000488767 MYO1DO94832 1006 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 CHEK2O96017 543 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 PDYNP01213 254 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 FAM58BPP0C7Q3 252 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 NR2F6P10588 404 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 ITGAMP11215 1152 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 PLA2G2AP14555 144 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 EFNA3P52797 238 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 TNFRSF17Q02223 184 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 TLE1Q04724 770 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 ZNF844Q08AG5 666 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 TLR1Q15399 786 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 ELAVL1Q15717 326 aaKnown RBP12.08□□□□□ -0.48
PHF1-210ENST00000488767 MEP1AQ16819 746 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 IMPG1Q17R60 797 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 NADK2Q4G0N4 442 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 BEND6Q5SZJ8 279 aaPredicted RBP12.08□□□□□ -0.48
PHF1-210ENST00000488767 CEP85LQ5SZL2 805 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 CCNYL2Q5T2Q4 361 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 SLC6A19Q695T7 634 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 FRMD7Q6ZUT3 714 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 PGM2Q96G03 612 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 FAM111AQ96PZ2 611 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 CSF3RQ99062 836 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 PELOQ9BRX2 385 aaKnown RBP12.08□□□□□ -0.48
PHF1-210ENST00000488767 SORBS1Q9BX66 1292 aaKnown RBP12.08□□□□□ -0.48
PHF1-210ENST00000488767 ALOXE3Q9BYJ1 711 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 DEFB126Q9BYW3 111 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.08□□□□□ -0.48
PHF1-210ENST00000488767 EPN3Q9H201 632 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 GSTO2Q9H4Y5 243 aa12.08□□□□□ -0.48
PHF1-210ENST00000488767 EML4Q9HC35 981 aaKnown RBP12.08□□□□□ -0.48
PHF1-210ENST00000488767 STMN3Q9NZ72 180 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms