RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 DEFB126Q9BYW3 111 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 MRPL46Q9H2W6 279 aaKnown RBP16.57■□□□□ 0.24
ITGB1-215ENST00000488494 ADGRE2Q9UHX3 823 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 ZNF223Q9UK11 482 aaPredicted RBP16.57■□□□□ 0.24
ITGB1-215ENST00000488494 PCTPQ9UKL6 214 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 TMCO1Q9UM00 188 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 RNF11Q9Y3C5 154 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 SPACA6W5XKT8 324 aa16.57■□□□□ 0.24
ITGB1-215ENST00000488494 H0YIV9 168 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 STX16-NPEPL1H3BU86 382 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 PLPP1O14494 284 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 STX16O14662 325 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 NEURL1O76050 574 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 SNRPAP09012 282 aaKnown RBP16.56■□□□□ 0.24
ITGB1-215ENST00000488494 COL6A2P12110 1019 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 CD46P15529 392 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 MST1P26927 711 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 GCAP28676 217 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 CLCN2P51788 898 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 KCNK10P57789 538 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 RPS13P62277 151 aaKnown RBP16.56■□□□□ 0.24
ITGB1-215ENST00000488494 ID2Q02363 134 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 ELAVL1Q15717 326 aaKnown RBP16.56■□□□□ 0.24
ITGB1-215ENST00000488494 DEPDC1Q5TB30 811 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 HORMAD2Q8N7B1 307 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 L3MBTL4Q8NA19 623 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 OR52B6Q8NGF0 335 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 THAP3Q8WTV1 239 aaPredicted RBP16.56■□□□□ 0.24
ITGB1-215ENST00000488494 RGMAQ96B86 450 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 VMP1Q96GC9 406 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 SCMH1Q96GD3 660 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 NSUN5Q96P11 429 aaKnown RBP16.56■□□□□ 0.24
ITGB1-215ENST00000488494 NOL11Q9H8H0 719 aaKnown RBP16.56■□□□□ 0.24
ITGB1-215ENST00000488494 LRFN1Q9P244 771 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 FBXW2Q9UKT8 454 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 TSC22D4Q9Y3Q8 395 aa16.56■□□□□ 0.24
ITGB1-215ENST00000488494 SPTBN1Q01082 2364 aaKnown RBP16.55■□□□□ 0.24
ITGB1-215ENST00000488494 A1L4Q6 167 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 SYNDIG1LA6NDD5 238 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 FCHO1O14526 889 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 OR7A17O14581 309 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 CTNSO60931 367 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 LDB3O75112 727 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 SLC25A12O75746 678 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 CLDN9O95484 217 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 DDAH2O95865 285 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 LDLRP01130 860 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 CPN2P22792 545 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 STX4Q12846 297 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 SLAMF1Q13291 335 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 ZRSR2Q15696 482 aaKnown RBP16.55■□□□□ 0.24
ITGB1-215ENST00000488494 OR4C11Q6IEV9 310 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 TMEM178AQ8NBL3 297 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 MRPL57Q9BQC6 102 aaKnown RBP16.55■□□□□ 0.24
ITGB1-215ENST00000488494 PPIEQ9UNP9 301 aaKnown RBP16.55■□□□□ 0.24
ITGB1-215ENST00000488494 PCDHGB6Q9Y5F9 930 aa16.55■□□□□ 0.24
ITGB1-215ENST00000488494 UNC5CO95185 931 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 ETHE1O95571 254 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 CYB561P49447 251 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 NEK2P51955 445 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 CCNG1P51959 295 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 TNFRSF17Q02223 184 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 TRAF3Q13114 568 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 GFRALQ6UXV0 394 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 GALNTL5Q7Z4T8 443 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 ARMC10Q8N2F6 343 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 TMEM132CQ8N3T6 1108 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 DNAJB8Q8NHS0 232 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 WDR20Q8TBZ3 569 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 SREK1Q8WXA9 508 aaKnown RBP16.54■□□□□ 0.24
ITGB1-215ENST00000488494 ATP6V1E2Q96A05 226 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 MTBPQ96DY7 904 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 FRMD6Q96NE9 622 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 CCDC77Q9BR77 488 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 ZNF717Q9BY31 904 aaPredicted RBP16.54■□□□□ 0.24
ITGB1-215ENST00000488494 ALOXE3Q9BYJ1 711 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 TXLNGYQ9BZA5 131 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 SEMA4BQ9NPR2 832 aaPredicted RBP16.54■□□□□ 0.24
ITGB1-215ENST00000488494 PLEKHB1Q9UF11 243 aaPredicted RBP16.54■□□□□ 0.24
ITGB1-215ENST00000488494 PHF11Q9UIL8 331 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 CLCA3PQ9Y6N3 262 aa16.54■□□□□ 0.24
ITGB1-215ENST00000488494 A8MT66 165 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 FGF17O60258 216 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 PRKNO60260 465 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 NME2P1O60361 137 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 EEDO75530 441 aaKnown RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 PRKRAO75569 313 aaKnown RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 ITGA10O75578 1167 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 SP1P08047 785 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 RPS17P08708 135 aaKnown RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 SBK3P0C264 359 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 NME2P22392 152 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 PTX3P26022 381 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 TRHRP34981 398 aaPredicted RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 HLCSP50747 726 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 GPR143P51810 404 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 HNRNPH2P55795 449 aaKnown RBP16.53■□□□□ 0.24
ITGB1-215ENST00000488494 SERTAD2Q14140 314 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 C4orf17Q53FE4 359 aa16.53■□□□□ 0.24
ITGB1-215ENST00000488494 LGSNQ5TDP6 509 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms