RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SLC37A3Q8NCC5 494 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 OR1L3Q8NH93 324 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 OR2T6Q8NHC8 308 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC12Q8WUD4 166 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 PYCR2Q96C36 320 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 DHTKD1Q96HY7 919 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 PLEKHF1Q96S99 279 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CCT8L2Q96SF2 557 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 PARK7Q99497 189 aaKnown RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CGREF1Q99674 301 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 NAPGQ99747 312 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 MAP3K3Q99759 626 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 CLEC7AQ9BXN2 247 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 YIPF3Q9GZM5 350 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 THAP2Q9H0W7 228 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ACTL8Q9H568 366 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 LMAN1LQ9HAT1 526 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 PKD2L2Q9NZM6 624 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 IFNKQ9P0W0 207 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 KLHL8Q9P2G9 620 aaPredicted RBP3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 IQGAP3Q86VI3 1631 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ERVK-7P63135 1459 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ABCC6O95255 1503 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP7AQ04656 1500 aa3.39□□□□□ -1.87
ECHDC1-217ENST00000488087 TCHHQ07283 1943 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ABCC12Q96J65 1359 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 JCADQ9P266 1359 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 BICRAQ9NZM4 1560 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 TROQ12816 1431 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 A0A0U1RQK1 487 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF320A2RRD8 509 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 MSGN1A6NI15 193 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM110-MUSTN1A8MSY1 372 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 SNURFLB1AK76 121 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 H0YAE9 185 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 FLRT2O43155 660 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 TTI1O43156 1089 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 MAGEC1O60732 1142 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 KHDRBS3O75525 346 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 SEC24AO95486 1093 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 SERPING1P05155 500 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 RPSAP08865 295 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 RNF224P0DH78 156 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 GP1BBP13224 206 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ACADSP16219 412 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP6V1C1P21283 382 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 CASP14P31944 242 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 HPDP32754 393 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 MDH1P40925 334 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF131P52739 623 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 PAX9P55771 341 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ERVK11-1P61568 191 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 IL1RL1Q01638 556 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 OPCMLQ14982 345 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 CAMK4Q16566 473 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 LYSMD4Q5XG99 296 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 IRGCQ6NXR0 463 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM182Q6ZP80 229 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 NCCRP1Q6ZVX7 275 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 MCM10Q7L590 875 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 OTOAQ7RTW8 1153 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM110Q86TL2 294 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 IQCKQ8N0W5 287 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 NUP93Q8N1F7 819 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 MMGT1Q8N4V1 131 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ARL6IP6Q8N6S5 226 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 OR10G8Q8NGN5 311 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 SMAP2Q8WU79 429 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 KIFAP3Q92845 792 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 P2RX5Q93086 422 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 BSCL2Q96G97 398 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 C10orf90Q96M02 699 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 LPAR4Q99677 370 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 NKX3-1Q99801 234 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 SYT15Q9BQS2 421 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 LLPHQ9BRT6 129 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 TIPINQ9BVW5 301 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 DGCR6LQ9BY27 220 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 NYXQ9GZU5 481 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 NACA2Q9H009 215 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 SDCBP2Q9H190 292 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 VCXQ9H320 206 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 MINDY3Q9H8M7 445 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 RNF121Q9H920 327 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 TUFT1Q9NNX1 390 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ABCB8Q9NUT2 735 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 RNF186Q9NXI6 227 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 SH3GLB1Q9Y371 365 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP6V0A2Q9Y487 856 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 BZW2Q9Y6E2 419 aaKnown RBP3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 COMMD3-BMI1R4GMX3 469 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 SPHKAPQ2M3C7 1700 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 MAP3K15Q6ZN16 1313 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 IGSF1Q8N6C5 1336 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 ADGRB1O14514 1584 aa3.38□□□□□ -1.87
ECHDC1-217ENST00000488087 A0A087X002 238 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 A0A1B0GVL5 298 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 A4D1N5 150 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 GMNCA6NCL1 334 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms