RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CCR4P51679 360 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 RIDAP52758 137 aaKnown RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 GEMP55040 296 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 GSTO1P78417 241 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 GALK2Q01415 458 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 GABPAQ06546 454 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 HSPA14Q0VDF9 509 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 PPP1R8Q12972 351 aaKnown RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 CALCOCO2Q13137 446 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 RAPSNQ13702 412 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 FASTKQ14296 549 aaKnown RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 KRT31Q15323 416 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 TRADDQ15628 312 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 SLC39A12Q504Y0 691 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 CT45A2Q5DJT8 189 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 FAM182AQ5T1J6 154 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 DOK6Q6PKX4 331 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 NHLRC1Q6VVB1 395 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 GDPGP1Q6ZNW5 385 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 ASPGQ86U10 573 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 TBC1D10CQ8IV04 446 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 LAX1Q8IWV1 398 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZC3H3Q8IXZ2 948 aaKnown RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 AQP11Q8NBQ7 271 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 TRPV3Q8NET8 790 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 BEST4Q8NFU0 473 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 OR6M1Q8NGM8 313 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 ATP8B4Q8TF62 1192 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 GTF3AQ92664 365 aaKnown RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 BCL2L2Q92843 193 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 CNRIP1Q96F85 164 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF599Q96NL3 588 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 S1PR3Q99500 378 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 DCTN5Q9BTE1 182 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 RBM24Q9BX46 236 aaKnown RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 OSBPL8Q9BZF1 889 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZDHHC6Q9H6R6 413 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 GTSE1Q9NYZ3 720 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 AKAP7Q9P0M2 348 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 UBQLN2Q9UHD9 624 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 MOSPD1Q9UJG1 213 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 MRTO4Q9UKD2 239 aaKnown RBP3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 MGAT4AQ9UM21 535 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 KIAA1217Q5T5P2 1943 aa3.15□□□□□ -1.91
HMGB1P36-201ENST00000487709 A0A0A6YYC8 382 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 IGKV6D-41A0A0C4DH26 115 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 TRBV2A0A0J9YWF9 115 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 SYCE3A1L190 88 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 BCLAF3A2AJT9 711 aaKnown RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 A8MXK9 166 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 LMO7DNF2Z398 122 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 I3L1I5 382 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 CHEK1O14757 476 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 MLNRO43193 412 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 KIAA0513O60268 411 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 AKAP3O75969 853 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 POP4O95707 220 aaKnown RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZSCAN5DPP0CG00 497 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 TPBGLP0DKB5 382 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 MBL2P11226 248 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 PCP11498 1178 aaKnown RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 ODC1P11926 461 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 CD1DP15813 335 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 STMN1P16949 149 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 SLC1A6P48664 564 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 EVCP57679 992 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 FKBP3Q00688 224 aaKnown RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 FCHO2Q0JRZ9 810 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 CBX3Q13185 183 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 ENPP2Q13822 863 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 GIT2Q14161 759 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 HEPACAMQ14CZ8 416 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 SPHARQ15513 63 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 MLF2Q15773 248 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 STX1AQ16623 288 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF730Q6ZMV8 503 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF497Q6ZNH5 498 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 C5orf24Q7Z6I8 188 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 FAM131BQ86XD5 332 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 ZNF440Q8IYI8 595 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 Q8NBF4 154 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 SIDT2Q8NBJ9 832 aaKnown RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 CLEC1AQ8NC01 280 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 PRCCQ92733 491 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 CABS1Q96KC9 395 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 C18orf12Q96KH6 178 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 FAM218AQ96MZ4 157 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 SSX3Q99909 188 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 CHCHD5Q9BSY4 110 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 TEX13AQ9BXU3 409 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 ABCG4Q9H172 646 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 GANQ9H2C0 597 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 TMEM245Q9H330 911 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 PRMT8Q9NR22 394 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 ACOXLQ9NUZ1 547 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 HMG20BQ9P0W2 317 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 KNSTRNQ9Y448 316 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 NOTCH2Q04721 2471 aa3.14□□□□□ -1.91
HMGB1P36-201ENST00000487709 EEF2KO00418 725 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms