RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 GPR180Q86V85 440 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 TMEM102Q8N9M5 508 aaPredicted RBP18.4■□□□□ 0.54
SEC22A-208ENST00000487572 PLPP5Q8NEB5 264 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 ZNF160Q9HCG1 818 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 PRDM9Q9NQV7 894 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 C19orf25Q9UFG5 118 aaPredicted RBP18.4■□□□□ 0.54
SEC22A-208ENST00000487572 PHF11Q9UIL8 331 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 ATG4BQ9Y4P1 393 aa18.4■□□□□ 0.54
SEC22A-208ENST00000487572 A6NL46 340 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 CLDN4O14493 209 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 PRKRAO75569 313 aaKnown RBP18.39■□□□□ 0.53
SEC22A-208ENST00000487572 CYC1P08574 325 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 FAM87AP0C7U9 286 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 COX6A1P12074 109 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 GRK2P25098 689 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 TPP2P29144 1249 aaPredicted RBP18.39■□□□□ 0.53
SEC22A-208ENST00000487572 SLC1A6P48664 564 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 TNFRSF17Q02223 184 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 C18orf63Q68DL7 685 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 NDUFAF7Q7L592 441 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 CPEB2Q7Z5Q1 589 aaKnown RBP18.39■□□□□ 0.53
SEC22A-208ENST00000487572 DDIASQ8IXT1 998 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 ZNF595Q8IYB9 648 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 CLYBLQ8N0X4 340 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 CLEC1AQ8NC01 280 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 CHTF18Q8WVB6 975 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 TWIST2Q8WVJ9 160 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 APIPQ96GX9 242 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 NECTIN3Q9NQS3 549 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 ZDHHC2Q9UIJ5 367 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 ADAM29Q9UKF5 820 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 MMACHCQ9Y4U1 282 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 ASB4Q9Y574 426 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 DNAJC15Q9Y5T4 150 aa18.39■□□□□ 0.53
SEC22A-208ENST00000487572 LOC102723996A0A087X1L8 192 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 IGHV1-45A0A0A0MS14 117 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 NSG1A0A0A6YYJ2 146 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 MYOCOSA0A1B0GUC4 107 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 SERTM1A2A2V5 107 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 ERVH48-1M5A8F1 160 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 PCDH17O14917 1159 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 SEC24DO94855 1032 aaPredicted RBP18.38■□□□□ 0.53
SEC22A-208ENST00000487572 FGF4P08620 206 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 LINC00032P0C843 101 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 BUD31P41223 144 aaPredicted RBP18.38■□□□□ 0.53
SEC22A-208ENST00000487572 MAPK12P53778 367 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 HSD17B7P56937 341 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 OR4D2P58180 307 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 ID2Q02363 134 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 ACTN3Q08043 901 aaPredicted RBP18.38■□□□□ 0.53
SEC22A-208ENST00000487572 ACSM2AQ08AH3 577 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 BST1Q10588 318 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 RAPSNQ13702 412 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 PCOLCEQ15113 449 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 SFT2D3Q587I9 215 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 ACSM2BQ68CK6 577 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 MRM1Q6IN84 353 aaKnown RBP18.38■□□□□ 0.53
SEC22A-208ENST00000487572 TRIM46Q7Z4K8 759 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 APLFQ8IW19 511 aaPredicted RBP18.38■□□□□ 0.53
SEC22A-208ENST00000487572 PARP9Q8IXQ6 854 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 ZNF700Q9H0M5 742 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 MS4A12Q9NXJ0 267 aa18.38■□□□□ 0.53
SEC22A-208ENST00000487572 A0A1W2PR48 441 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 GLOD5A6NK44 160 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 SLC28A1O00337 649 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 PROM1O43490 865 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 LDB3O75112 727 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 SKAP2O75563 359 aaPredicted RBP18.37■□□□□ 0.53
SEC22A-208ENST00000487572 AIFM1O95831 613 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 HPP00738 406 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 NR2F6P10588 404 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 TLX1P31314 330 aaPredicted RBP18.37■□□□□ 0.53
SEC22A-208ENST00000487572 SPIN4Q56A73 249 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 SCUBE1Q8IWY4 988 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 AMER2Q8N7J2 671 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 ZNF781Q8N8C0 355 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 EBPLQ9BY08 206 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 C20orf27Q9GZN8 174 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 TUBB1Q9H4B7 451 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 RPF2Q9H7B2 306 aaKnown RBP18.37■□□□□ 0.53
SEC22A-208ENST00000487572 ATP13A2Q9NQ11 1180 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 TEX10Q9NXF1 929 aaPredicted RBP18.37■□□□□ 0.53
SEC22A-208ENST00000487572 MGAQ8IWI9 3026 aa18.37■□□□□ 0.53
SEC22A-208ENST00000487572 IGKV3D-11A0A0A0MRZ8 115 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 GNG14A0A1W2PPG7 69 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 A8MUA0 341 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 TGFBR3LH3BV60 316 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 PIP5K1BO14986 540 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 RGS14O43566 566 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 PCDH7O60245 1069 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 CTNSO60931 367 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 RSL1D1O76021 490 aaKnown RBP18.36■□□□□ 0.53
SEC22A-208ENST00000487572 ITGA3P26006 1051 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 STX4Q12846 297 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 LY6DQ14210 128 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 UGT3A2Q3SY77 523 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 OR4N5Q8IXE1 308 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 OR2T11Q8NH01 316 aa18.36■□□□□ 0.53
SEC22A-208ENST00000487572 UBL7Q96S82 380 aaPredicted RBP18.36■□□□□ 0.53
SEC22A-208ENST00000487572 SORT1Q99523 831 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms