RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 RHOXF2Q9BQY4 288 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 SORBS1Q9BX66 1292 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 NOL11Q9H8H0 719 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 SLC24A3Q9HC58 644 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 ADAP2Q9NPF8 381 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 DMRT3Q9NQL9 472 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 KLHL1Q9NR64 748 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 RYDENQ9NUL5 291 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 LRFN1Q9P244 771 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 FBXW2Q9UKT8 454 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 TMCO1Q9UM00 188 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 OSGIN2Q9Y236 505 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 RNF11Q9Y3C5 154 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 PCDHGA11Q9Y5H2 935 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 SPTAN1Q13813 2472 aaKnown RBP10.69□□□□□ -0.7
SPEN-205ENST00000487496 SVILO95425 2214 aa10.69□□□□□ -0.7
SPEN-205ENST00000487496 ICE1Q9Y2F5 2266 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 COL12A1Q99715 3063 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 TRBV11-1A0A0K0K1C0 115 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 SYNDIG1LA6NDD5 238 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 STX16-NPEPL1H3BU86 382 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 PLPP1O14494 284 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 OR7A17O14581 309 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 STX16O14662 325 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 RIPK2O43353 540 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 SMIM24O75264 130 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 CLDN9O95484 217 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 LDLRP01130 860 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 IFNA16P05015 189 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 FAM153BP0C7A2 387 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 PTX3P26022 381 aaPredicted RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 GCAP28676 217 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 TRHRP34981 398 aaPredicted RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 CYB561P49447 251 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 NEK2P51955 445 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 RAP1GDS1P52306 607 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 STX4Q12846 297 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 SLAMF1Q13291 335 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 ELAVL1Q15717 326 aaKnown RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 FAM153CQ494X1 144 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 SLC25A25Q6KCM7 469 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 GFRALQ6UXV0 394 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 TMEM132CQ8N3T6 1108 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 ZCCHC7Q8N3Z6 543 aaKnown RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 TMEM151AQ8N4L1 468 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 HORMAD2Q8N7B1 307 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 TMEM178AQ8NBL3 297 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 OR52B6Q8NGF0 335 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 WDR20Q8TBZ3 569 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 THAP3Q8WTV1 239 aaPredicted RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 NCLNQ969V3 563 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 ATP6V1E2Q96A05 226 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 RGMAQ96B86 450 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 REPS1Q96D71 796 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 VMP1Q96GC9 406 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 CDK15Q96Q40 435 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 MRPL57Q9BQC6 102 aaKnown RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 CENPKQ9BS16 269 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 ALOXE3Q9BYJ1 711 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 TRIM45Q9H8W5 580 aaPredicted RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 VTI1BQ9UEU0 232 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 PLEKHB1Q9UF11 243 aaPredicted RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 ZNF223Q9UK11 482 aaPredicted RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 SPACA6W5XKT8 324 aa10.68□□□□□ -0.7
SPEN-205ENST00000487496 SPTBN1Q01082 2364 aaKnown RBP10.68□□□□□ -0.7
SPEN-205ENST00000487496 MYOCOSA0A1B0GUC4 107 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ASPDHA6ND91 283 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 FCHO1O14526 889 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 LRRTM2O43300 516 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 LDB3O75112 727 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 WISP2O76076 250 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ZFAND5O76080 213 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 UNC5CO95185 931 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ETHE1O95571 254 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 SP1P08047 785 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 STSP08842 583 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 SBK3P0C264 359 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 CPN2P22792 545 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 HLCSP50747 726 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 CCNG1P51959 295 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ARFIP1P53367 373 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 KCNK10P57789 538 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 PHEXP78562 749 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ID2Q02363 134 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 CUL3Q13618 768 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 SERTAD2Q14140 314 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 SLC29A2Q14542 456 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ZRSR2Q15696 482 aaKnown RBP10.67□□□□□ -0.7
SPEN-205ENST00000487496 MAPKAPK3Q16644 382 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 C4orf17Q53FE4 359 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ADGRD1Q6QNK2 874 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 TIFABQ6ZNK6 161 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 GALNTL5Q7Z4T8 443 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 ZNF227Q86WZ6 799 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 LRRN4CLQ8ND94 238 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 PTPMT1Q8WUK0 201 aaPredicted RBP10.67□□□□□ -0.7
SPEN-205ENST00000487496 DAZLQ92904 295 aaKnown RBP10.67□□□□□ -0.7
SPEN-205ENST00000487496 ANKRD9Q96BM1 317 aaPredicted RBP10.67□□□□□ -0.7
SPEN-205ENST00000487496 MTBPQ96DY7 904 aa10.67□□□□□ -0.7
SPEN-205ENST00000487496 NSUN5Q96P11 429 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms