RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CALML6Q8TD86 181 aa14.17□□□□□ -0.14
MCF2L-228ENST00000487354 SARAFQ96BY9 339 aa14.17□□□□□ -0.14
MCF2L-228ENST00000487354 FAM167BQ9BTA0 163 aa14.17□□□□□ -0.14
MCF2L-228ENST00000487354 NPLQ9BXD5 320 aaPredicted RBP14.17□□□□□ -0.14
MCF2L-228ENST00000487354 PROK2Q9HC23 129 aa14.17□□□□□ -0.14
MCF2L-228ENST00000487354 XAB2Q9HCS7 855 aaKnown RBP14.17□□□□□ -0.14
MCF2L-228ENST00000487354 TAS2R13Q9NYV9 303 aa14.17□□□□□ -0.14
MCF2L-228ENST00000487354 SLC17A6Q9P2U8 582 aa14.17□□□□□ -0.14
MCF2L-228ENST00000487354 FBN1P35555 2871 aaKnown RBP14.17□□□□□ -0.14
MCF2L-228ENST00000487354 RTTNQ86VV8 2226 aa14.17□□□□□ -0.14
MCF2L-228ENST00000487354 NRDCO43847 1150 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 GUCA1CO95843 209 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 INHBBP09529 407 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 HIST1H2AGP0C0S8 130 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-228ENST00000487354 HIST1H2ADP20671 130 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 CEACAM8P31997 349 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-228ENST00000487354 PIGAP37287 484 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 ASCL1P50553 236 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 RNF4P78317 190 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 SARNPP82979 210 aaKnown RBP14.16□□□□□ -0.14
MCF2L-228ENST00000487354 SLC13A2Q13183 592 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 BBS9Q3SYG4 887 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 WLSQ5T9L3 541 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 ADNP2Q6IQ32 1131 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 FAM47EQ6ZV65 393 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 VN1R5Q7Z5H4 357 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 THOC6Q86W42 341 aaKnown RBP14.16□□□□□ -0.14
MCF2L-228ENST00000487354 CNTN4Q8IWV2 1026 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 PALM2Q8IXS6 379 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 ULK2Q8IYT8 1036 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 TNIP2Q8NFZ5 429 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 RNASE6Q93091 150 aaKnown RBP14.16□□□□□ -0.14
MCF2L-228ENST00000487354 HIST1H2AHQ96KK5 128 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 HIST1H2AJQ99878 128 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 AIF1LQ9BQI0 150 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 H2AFJQ9BTM1 129 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 SLC6A15Q9H2J7 730 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 PLAC1Q9HBJ0 212 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 SACM1LQ9NTJ5 587 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 GUCA1BQ9UMX6 200 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 SLC22A14Q9Y267 594 aa14.16□□□□□ -0.14
MCF2L-228ENST00000487354 TRGV5A0A0B4J1U4 118 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 LRIT2A6NDA9 550 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 ERI3O43414 337 aaKnown RBP14.15□□□□□ -0.14
MCF2L-228ENST00000487354 AHSGP02765 367 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 HEXAP06865 529 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 GABRA1P14867 456 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 BMP5P22003 454 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 CERS1P27544 350 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 PEX19P40855 299 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 LIM2P55344 173 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 CRYMQ14894 314 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 SLC10A1Q14973 349 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 RBBP5Q15291 538 aaKnown RBP14.15□□□□□ -0.14
MCF2L-228ENST00000487354 ZNF791Q3KP31 576 aaPredicted RBP14.15□□□□□ -0.14
MCF2L-228ENST00000487354 ADPRMQ3LIE5 342 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 ZNF595Q8IYB9 648 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 TMEM132CQ8N3T6 1108 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 MORN4Q8NDC4 146 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 OR8K3Q8NH51 312 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 SLC2A12Q8TD20 617 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 SGCZQ96LD1 299 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 VTI1BQ9UEU0 232 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 PCDHGB3Q9Y5G1 929 aa14.15□□□□□ -0.14
MCF2L-228ENST00000487354 ANK3Q12955 4377 aaKnown RBP14.15□□□□□ -0.14
MCF2L-228ENST00000487354 MED12Q93074 2177 aa14.15□□□□□ -0.15
MCF2L-228ENST00000487354 HSPB2A8KAH6 182 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 FAM47E-STBD1D6RA91 191 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 ETHE1O95571 254 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 KRT14P02533 472 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 ENO2P09104 434 aaPredicted RBP14.14□□□□□ -0.15
MCF2L-228ENST00000487354 CCDC175P0C221 793 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 CD53P19397 219 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 ZNF136P52737 540 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 IL2P60568 153 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 STXBP1P61764 594 aaKnown RBP14.14□□□□□ -0.15
MCF2L-228ENST00000487354 BMPR2Q13873 1038 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 HSPB2Q16082 182 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 C18orf21Q32NC0 220 aaPredicted RBP14.14□□□□□ -0.15
MCF2L-228ENST00000487354 ACSF3Q4G176 576 aaPredicted RBP14.14□□□□□ -0.15
MCF2L-228ENST00000487354 CLEC9AQ6UXN8 241 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 SLCO4C1Q6ZQN7 724 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 CHSY3Q70JA7 882 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 KLHDC8AQ8IYD2 350 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 LRRC25Q8N386 305 aaPredicted RBP14.14□□□□□ -0.15
MCF2L-228ENST00000487354 TXLNBQ8N3L3 684 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 NAT8LQ8N9F0 302 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 OR14A16Q8NHC5 309 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 ZNF721Q8TF20 911 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 ATL1Q8WXF7 558 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 CAPZA3Q96KX2 299 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 OR8D2Q9GZM6 311 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 LDAHQ9H6V9 325 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 ALKBH4Q9NXW9 302 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 DAPP1Q9UN19 280 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 DYRK1BQ9Y463 629 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 MAD1L1Q9Y6D9 718 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 CLCA3PQ9Y6N3 262 aa14.14□□□□□ -0.15
MCF2L-228ENST00000487354 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.14□□□□□ -0.15
MCF2L-228ENST00000487354 COL6A5A8TX70 2615 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms