RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ZNF740Q8NDX6 193 aa24.9■■□□□ 1.58
HLA-C-208ENST00000487245 PIP5K1AQ99755 562 aa24.9■■□□□ 1.58
HLA-C-208ENST00000487245 NT5DC2Q9H857 520 aa24.9■■□□□ 1.58
HLA-C-208ENST00000487245 ZNF226Q9NYT6 803 aa24.9■■□□□ 1.58
HLA-C-208ENST00000487245 ANKDD1BA6NHY2 528 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 GPR89AB7ZAQ6 455 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 TBX19O60806 448 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 OPN1SWP03999 348 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 GPR89BP0CG08 455 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 LIPAP38571 399 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 CDH12P55289 794 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 IFITM3Q01628 133 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 TUBA3EQ6PEY2 450 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 Q6ZPB1 254 aaPredicted RBP24.89■■□□□ 1.58
HLA-C-208ENST00000487245 SLC46A3Q7Z3Q1 461 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 CCDC103Q8IW40 242 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 RPL3LQ92901 407 aaKnown RBP24.89■■□□□ 1.58
HLA-C-208ENST00000487245 CIDECQ96AQ7 238 aaPredicted RBP24.89■■□□□ 1.58
HLA-C-208ENST00000487245 MMP27Q9H306 513 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 WASH6PQ9NQA3 447 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 DOLKQ9UPQ8 538 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 ANGPT4Q9Y264 503 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 ZNF451Q9Y4E5 1061 aa24.89■■□□□ 1.58
HLA-C-208ENST00000487245 KMOO15229 486 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 PCCBP05166 539 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 IL3P08700 152 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 TGM1P22735 817 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 CTSKP43235 329 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 RPS3AP61247 264 aaKnown RBP24.89■■□□□ 1.57
HLA-C-208ENST00000487245 SFSWAPQ12872 951 aaKnown RBP24.89■■□□□ 1.57
HLA-C-208ENST00000487245 RUNX3Q13761 415 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 IRF3Q14653 427 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 DEPDC1Q5TB30 811 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 PAGE2Q7Z2X7 111 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 COL21A1Q96P44 957 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 QRFPRQ96P65 431 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 DCSTAMPQ9H295 470 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 DSN1Q9H410 356 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 MIEF1Q9NQG6 463 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 RLIMQ9NVW2 624 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 SLC23A2Q9UGH3 650 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 PLAGL1Q9UM63 463 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 PRKAB1Q9Y478 270 aa24.89■■□□□ 1.57
HLA-C-208ENST00000487245 KRBA1A5PL33 1030 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 IGLON5A6NGN9 336 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 UQCRC2P22695 453 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 TEAD1P28347 426 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 CD40LGP29965 261 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 AGERQ15109 404 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 SLC5A12Q1EHB4 618 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 IER5LQ5T953 404 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 UBE2Q1Q7Z7E8 422 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 SMPDL3AQ92484 453 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 CRELD1Q96HD1 420 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 ACER3Q9NUN7 267 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 HCN4Q9Y3Q4 1203 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 PCYT1BQ9Y5K3 369 aaPredicted RBP24.88■■□□□ 1.57
HLA-C-208ENST00000487245 ENPP4Q9Y6X5 453 aa24.88■■□□□ 1.57
HLA-C-208ENST00000487245 AIREO43918 545 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 TNFRSF1BP20333 461 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 EIF2DP41214 584 aaKnown RBP24.87■■□□□ 1.57
HLA-C-208ENST00000487245 GSTM5P46439 218 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 PPP5CP53041 499 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 TIGD6Q17RP2 521 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 TOR1AIP1Q5JTV8 583 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 KHDRBS2Q5VWX1 349 aaKnown RBP24.87■■□□□ 1.57
HLA-C-208ENST00000487245 NUDT18Q6ZVK8 323 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 RNF130Q86XS8 419 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 LACC1Q8IV20 430 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 NIPSNAP1Q9BPW8 284 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 MAPKAP1Q9BPZ7 522 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 NXF2Q9GZY0 626 aaKnown RBP24.87■■□□□ 1.57
HLA-C-208ENST00000487245 ZNF556Q9HAH1 456 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 TRNAU1APQ9NX07 287 aaKnown RBP24.87■■□□□ 1.57
HLA-C-208ENST00000487245 ACSL5Q9ULC5 683 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 METTL15A6NJ78 407 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 CBLP22681 906 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 FCARP24071 287 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 TPP2P29144 1249 aaPredicted RBP24.87■■□□□ 1.57
HLA-C-208ENST00000487245 CLK1P49759 484 aaKnown RBP24.87■■□□□ 1.57
HLA-C-208ENST00000487245 CCR8P51685 355 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 ERVK-21P61565 698 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 PRSS53Q2L4Q9 553 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 WSCD2Q2TBF2 565 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 USP43Q70EL4 1123 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 GET4Q7L5D6 327 aaPredicted RBP24.87■■□□□ 1.57
HLA-C-208ENST00000487245 RAB42Q8N4Z0 105 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 MCFD2Q8NI22 146 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 C9orf43Q8TAL5 461 aaPredicted RBP24.87■■□□□ 1.57
HLA-C-208ENST00000487245 PROX1Q92786 737 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 NLNQ9BYT8 704 aa24.87■■□□□ 1.57
HLA-C-208ENST00000487245 KAT7O95251 611 aa24.86■■□□□ 1.57
HLA-C-208ENST00000487245 RHCEP18577 417 aa24.86■■□□□ 1.57
HLA-C-208ENST00000487245 C21orf33P30042 268 aaPredicted RBP24.86■■□□□ 1.57
HLA-C-208ENST00000487245 GJA4P35212 333 aa24.86■■□□□ 1.57
HLA-C-208ENST00000487245 OR1E2P47887 323 aa24.86■■□□□ 1.57
HLA-C-208ENST00000487245 CBX3Q13185 183 aa24.86■■□□□ 1.57
HLA-C-208ENST00000487245 TANGO2Q6ICL3 276 aa24.86■■□□□ 1.57
HLA-C-208ENST00000487245 TEX101Q9BY14 249 aa24.86■■□□□ 1.57
HLA-C-208ENST00000487245 MS4A8Q9BY19 250 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms