RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SMIM10Q96HG1 83 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 OR8D2Q9GZM6 311 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 ADAP2Q9NPF8 381 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 QPCTLQ9NXS2 382 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 PSD3Q9NYI0 1048 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 ZNF226Q9NYT6 803 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 CNOT11Q9UKZ1 510 aaKnown RBP13.86□□□□□ -0.19
U2AF1-211ENST00000486519 ZNF148Q9UQR1 794 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 TCAF1Q9Y4C2 921 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 MMACHCQ9Y4U1 282 aa13.86□□□□□ -0.19
U2AF1-211ENST00000486519 CHCHD2Q9Y6H1 151 aaPredicted RBP13.86□□□□□ -0.19
U2AF1-211ENST00000486519 EXPH5Q8NEV8 1989 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 A0A0G2JN53 185 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 GOLGA8KD6RF30 607 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 GOLGA8TH3BQL2 631 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 GFYI3L273 518 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 PJA2O43164 708 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 NDUFS3O75489 264 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 TRAPPC6AO75865 159 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 RCBTB2O95199 551 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 C1QAP02745 245 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 HRH2P25021 359 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 ARNTP27540 789 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 OCRLQ01968 901 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 AARS2Q5JTZ9 985 aaKnown RBP13.85□□□□□ -0.19
U2AF1-211ENST00000486519 CCDC181Q5TID7 509 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 ANKRD34AQ69YU3 496 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 ZNF474Q6S9Z5 364 aaPredicted RBP13.85□□□□□ -0.19
U2AF1-211ENST00000486519 CYHR1Q6ZMK1 362 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 ZNF704Q6ZNC4 412 aaPredicted RBP13.85□□□□□ -0.19
U2AF1-211ENST00000486519 PM20D2Q8IYS1 436 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 RCOR2Q8IZ40 523 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 FAM47BQ8NA70 645 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 NT5CQ8TCD5 201 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 ASB11Q8WXH4 323 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 LPGAT1Q92604 370 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 LCORQ96JN0 433 aaPredicted RBP13.85□□□□□ -0.19
U2AF1-211ENST00000486519 PPP1R2P1Q96PQ5 205 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 KCNK17Q96T54 332 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 G6PC3Q9BUM1 346 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 SLCO5A1Q9H2Y9 848 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 L2HGDHQ9H9P8 463 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 CHRAC1Q9NRG0 131 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 PRTFDC1Q9NRG1 225 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 RIMKLBQ9ULI2 386 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 LAMP3Q9UQV4 416 aa13.85□□□□□ -0.19
U2AF1-211ENST00000486519 TRRAPQ9Y4A5 3859 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.84□□□□□ -0.19
U2AF1-211ENST00000486519 OVOL3O00110 214 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 TRIM3O75382 744 aaPredicted RBP13.84□□□□□ -0.19
U2AF1-211ENST00000486519 IGHV4-39P01824 125 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 GYPCP04921 128 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 THBDP07204 575 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 ADRA1DP25100 572 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 PPARGP37231 505 aaPredicted RBP13.84□□□□□ -0.19
U2AF1-211ENST00000486519 CDKN1AP38936 164 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 NAGLUP54802 743 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 CRADDP78560 199 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 PIGGQ5H8A4 983 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 FNDC7Q5VTL7 733 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 VWA1Q6PCB0 445 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 C17orf64Q86WR6 236 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 LRRC6Q86X45 466 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 PRELID2Q8N945 189 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 TC2NQ8N9U0 490 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 LRRC45Q96CN5 670 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 MRFAP1L1Q96HT8 127 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 CSF3RQ99062 836 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 UBQLN3Q9H347 655 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 ANO10Q9NW15 660 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 ANAPC5Q9UJX4 755 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 CAPN11Q9UMQ6 739 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 CRYL1Q9Y2S2 319 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 MED16Q9Y2X0 877 aa13.84□□□□□ -0.19
U2AF1-211ENST00000486519 KLF4O43474 513 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 AVILO75366 819 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 SMNDC1O75940 238 aaKnown RBP eCLIP13.83□□□□□ -0.2
U2AF1-211ENST00000486519 ETHE1O95571 254 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 CHRM3P20309 590 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 THBS2P35442 1172 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 UGT2B10P36537 528 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 CDK9P50750 372 aaKnown RBP13.83□□□□□ -0.2
U2AF1-211ENST00000486519 CLCN7P51798 805 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 CCZ1BP86790 482 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 CCZ1P86791 482 aaPredicted RBP13.83□□□□□ -0.2
U2AF1-211ENST00000486519 CDH17Q12864 832 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 SLC13A2Q13183 592 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 PWP1Q13610 501 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 ELAVL1Q15717 326 aaKnown RBP13.83□□□□□ -0.2
U2AF1-211ENST00000486519 STX1AQ16623 288 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 CLEC17AQ6ZS10 378 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 BTLAQ7Z6A9 289 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 ADGRE4PQ86SQ3 457 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 ANKRD53Q8N9V6 530 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 SLC2A12Q8TD20 617 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 FAM111AQ96PZ2 611 aa13.83□□□□□ -0.2
U2AF1-211ENST00000486519 OPN3Q9H1Y3 402 aaPredicted RBP13.83□□□□□ -0.2
U2AF1-211ENST00000486519 EIF2B3Q9NR50 452 aaKnown RBP13.83□□□□□ -0.2
U2AF1-211ENST00000486519 GDF2Q9UK05 429 aaPredicted RBP13.83□□□□□ -0.2
U2AF1-211ENST00000486519 PACSIN3Q9UKS6 424 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms