RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 B3GNT3Q9Y2A9 372 aa8.9□□□□□ -0.98
TMEM39A-208ENST00000486159 PADI2Q9Y2J8 665 aa8.9□□□□□ -0.98
TMEM39A-208ENST00000486159 HS3ST3B1Q9Y662 390 aa8.9□□□□□ -0.98
TMEM39A-208ENST00000486159 LRRC14BA6NHZ5 514 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 SLC28A1O00337 649 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PEX12O00623 359 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PIP5K1BO14986 540 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 TAPBPO15533 448 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 UGDHO60701 494 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PSIP1O75475 530 aaKnown RBP8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 KLHL18O94889 574 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 LDLRP01130 860 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 STATHP02808 62 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 CATP04040 527 aaKnown RBP8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 CELA2AP08217 269 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 SNRPB2P08579 225 aaKnown RBP8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ITGA3P26006 1051 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 HMOX2P30519 316 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 CPA2P48052 419 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ST13P50502 369 aaKnown RBP8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 CCNG1P51959 295 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 EFNA3P52797 238 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ERVK-8P63133 956 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PCDH1Q08174 1060 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ART3Q13508 389 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 CUL3Q13618 768 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 GGTA1PQ4G0N0 100 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 CLEC6AQ6EIG7 209 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 FBXO42Q6P3S6 717 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PGM2L1Q6PCE3 622 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 AAGABQ6PD74 315 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 SUSD1Q6UWL2 747 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 Q6ZS92 163 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 OVCH1Q7RTY7 1134 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 MILR1Q7Z6M3 343 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 DCUN1D3Q8IWE4 304 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ULK2Q8IYT8 1036 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 FAM9CQ8IZT9 166 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PGAM4Q8N0Y7 254 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PCYOX1LQ8NBM8 494 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 CLEC1AQ8NC01 280 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 JADE3Q92613 823 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 STMN2Q93045 179 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ROPN1LQ96C74 230 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 FBXL8Q96CD0 374 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 TUBGCP3Q96CW5 907 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PPP3R2Q96LZ3 170 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 FER1L6-AS2Q96M78 137 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 CCDC138Q96M89 665 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ANKRD27Q96NW4 1050 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 THTPAQ9BU02 230 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ACAT2Q9BWD1 397 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 DENND2DQ9H6A0 471 aaPredicted RBP8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 NOL11Q9H8H0 719 aaKnown RBP8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 AKTIPQ9H8T0 292 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 IPPKQ9H8X2 491 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 RNPEPL1Q9HAU8 725 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 SDR39U1Q9NRG7 319 aaPredicted RBP8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 C5AR2Q9P296 337 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 ADAMTS6Q9UKP5 1117 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PDE10AQ9Y233 779 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 NDUFAF1Q9Y375 327 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 FIS1Q9Y3D6 152 aa8.89□□□□□ -0.99
TMEM39A-208ENST00000486159 PCM1Q15154 2024 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 CACNA1DQ01668 2161 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 A0A088AWK7 358 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 LOC100653049A0A140TA62 436 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 A0A1B0GX78 115 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 SERTM1A2A2V5 107 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 ANKUB1A6NFN9 424 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 WIPF3A6NGB9 483 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 OR7A17O14581 309 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 DSCR3O14972 297 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 RGS14O43566 566 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 FKBP6O75344 327 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 KRT34O76011 436 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 WISP2O76076 250 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 OR4F21O95013 312 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 F10P00742 488 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 KRT6AP02538 564 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 KRT6BP04259 564 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 EIF2S1P05198 315 aaKnown RBP8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 TSPAN8P19075 237 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 MMP11P24347 488 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 KRT6CP48668 564 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 HSPA7P48741 367 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 ACTR3P61158 418 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 EMX2Q04743 252 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 TRAF3Q13114 568 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 RPS6KA2Q15349 733 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 CYP2A13Q16696 494 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 PHKG1Q16816 387 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 ATP6AP1LQ52LC2 224 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 PDCD4Q53EL6 469 aaKnown RBP8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 VWA2Q5GFL6 755 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 C10orf62Q5T681 223 aaPredicted RBP8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 PRAMEF13Q5VWM6 474 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 TMEM198Q66K66 360 aa8.88□□□□□ -0.99
TMEM39A-208ENST00000486159 PRMT9Q6P2P2 845 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms