RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 HTR6P50406 440 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 EMP2P54851 167 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 IGLV3-21P80748 117 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 OCA2Q04671 838 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 CHIT1Q13231 466 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 CUL3Q13618 768 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 TSTA3Q13630 321 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 RAPSNQ13702 412 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 RUNX2Q13950 521 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 SLBPQ14493 270 aaKnown RBP eCLIP5.37□□□□□ -1.55
CUX1-208ENST00000485792 PFKFB4Q16877 469 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 PRSS53Q2L4Q9 553 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 SPRED3Q2MJR0 410 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 TUBB8Q3ZCM7 444 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 NADK2Q4G0N4 442 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 LACTB2Q53H82 288 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 TEX35Q5T0J7 233 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 C10orf62Q5T681 223 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 DEPDC1Q5TB30 811 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 DGAT2L6Q6ZPD8 337 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 Q6ZS92 163 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 RAPH1Q70E73 1250 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 FRA10AC1Q70Z53 315 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 ABHD13Q7L211 337 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 NDUFAF7Q7L592 441 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 PRSS58Q8IYP2 241 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 IQCKQ8N0W5 287 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 MMP21Q8N119 569 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 KRT78Q8N1N4 520 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 CA13Q8N1Q1 262 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 GALNT16Q8N428 558 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 OR2L5Q8NG80 312 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 OR6Y1Q8NGX8 325 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 C9orf43Q8TAL5 461 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 ZNF483Q8TF39 744 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 TBC1D20Q96BZ9 403 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 L3HYPDHQ96EM0 354 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 LMF1Q96S06 567 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 EGFL8Q99944 293 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 TBCDQ9BTW9 1192 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 SLC25A23Q9BV35 468 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 SLC7A5P2Q9GIP4 190 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 RNF32Q9H0A6 362 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 EPN3Q9H201 632 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 MRPL46Q9H2W6 279 aaKnown RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 C12orf49Q9H741 205 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 TRIM45Q9H8W5 580 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 ANKHQ9HCJ1 492 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 RRAGDQ9NQL2 400 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 MKS1Q9NXB0 559 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 WWOXQ9NZC7 414 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 CD274Q9NZQ7 290 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 TMEM216Q9P0N5 145 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 LUZP4Q9P127 313 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 HCN3Q9P1Z3 774 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 PSMC3IPQ9P2W1 217 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 XPR1Q9UBH6 696 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 TRPC4Q9UBN4 977 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 LGALS13Q9UHV8 139 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 GPN3Q9UHW5 284 aaPredicted RBP5.37□□□□□ -1.55
CUX1-208ENST00000485792 C3orf18Q9UK00 162 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 FBXL4Q9UKA2 621 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 DAPP1Q9UN19 280 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 CACNA1DQ01668 2161 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 MED12Q93074 2177 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 DCHS2Q6V1P9 2916 aa5.37□□□□□ -1.55
CUX1-208ENST00000485792 MPDZO75970 2070 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 CSMD1Q96PZ7 3565 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 URADA6NGE7 173 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 NPIPB8E9PQR5 432 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 FAM227AF5H4B4 570 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 GOLGA8RI6L899 631 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 RTCAO00442 366 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 CLGNO14967 610 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PRKNO60260 465 aaPredicted RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 DLX3O60479 287 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 KLHL41O60662 606 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 CDH16O75309 829 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 H2AFYO75367 372 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 SLU7O95391 586 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 CLPSP04118 112 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 SERPINA7P05543 415 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PRR35P0CG20 571 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ZNF888P0CJ79 500 aaPredicted RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 ICAM2P13598 275 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 CHN1P15882 459 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 TSPAN8P19075 237 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 IMPDH1P20839 514 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 ATP5A1P25705 553 aaKnown RBP5.36□□□□□ -1.55
CUX1-208ENST00000485792 OTX2P32243 289 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 CRHR1P34998 444 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 BSGP35613 385 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 UQCRFS1P47985 274 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PIK3CGP48736 1102 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 CCL11P51671 97 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 PRKAA2P54646 552 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 FOXA1P55317 472 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 LIM2P55344 173 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 HSD17B7P56937 341 aa5.36□□□□□ -1.55
CUX1-208ENST00000485792 STXBP1P61764 594 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms