RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 AKIRIN1Q9H9L7 192 aaPredicted RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 ATP13A2Q9NQ11 1180 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 ACSS2Q9NR19 701 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 SLC22A11Q9NSA0 550 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 C1orf109Q9NX04 203 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 CTSFQ9UBX1 484 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 MAPRE3Q9UPY8 281 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 MRPS2Q9Y399 296 aaKnown RBP7.8□□□□□ -1.16
SF3A1-208ENST00000485618 TIMM22Q9Y584 194 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 HECTD1Q9ULT8 2610 aa7.8□□□□□ -1.16
SF3A1-208ENST00000485618 KALRNO60229 2985 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 NSG1A0A0A6YYJ2 146 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 A0A0G2JN53 185 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ZNF860A6NHJ4 632 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 PLPP1O14494 284 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 NKX2-8O15522 239 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 PCDH7O60245 1069 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 SH3BGRLO75368 114 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 MED26O95402 600 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ALPPP05187 535 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 CHRNGP07510 517 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 NR2F6P10588 404 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 DRD2P14416 443 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 TNNI3P19429 210 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 F8A1P23610 371 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 CERS1P27544 350 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 RPL3P39023 403 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ASMTP46597 345 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 WDR4P57081 412 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 MAT1AQ00266 395 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 BTKQ06187 659 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 BST1Q10588 318 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 AIMP2Q13155 320 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 NR6A1Q15406 480 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 EXT1Q16394 746 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 SMU1Q2TAY7 513 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 DEFB109BQ30KR1 87 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ATP6AP1LQ52LC2 224 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 C6orf163Q5TEZ5 329 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 KANK2Q63ZY3 851 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 LCN10Q6JVE6 187 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 GALNT18Q6P9A2 607 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 COX15Q7KZN9 410 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 NDUFAF7Q7L592 441 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 PRSS41Q7RTY9 318 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 COMMD6Q7Z4G1 85 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 CPEB2Q7Z5Q1 589 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ZC3H7AQ8IWR0 971 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 LRRC34Q8IZ02 419 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 CA13Q8N1Q1 262 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 OR5T3Q8NGG3 340 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 OR6Y1Q8NGX8 325 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 CHTF18Q8WVB6 975 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 TWIST2Q8WVJ9 160 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ZNF75CPQ92670 426 aaPredicted RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 DAZLQ92904 295 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 TUBGCP3Q96CW5 907 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 RNF31Q96EP0 1072 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 RBM18Q96H35 190 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 SPSB2Q99619 263 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 PRPF18Q99633 342 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 LPAR4Q99677 370 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 TUBB6Q9BUF5 446 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 MRPL1Q9BYD6 325 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 RPF2Q9H7B2 306 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 SYNPO2LQ9H987 977 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 LRTM1Q9HBL6 345 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 MLXIPLQ9NP71 852 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 PRTFDC1Q9NRG1 225 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 FARSBQ9NSD9 589 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 GIMAP4Q9NUV9 329 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ZNF446Q9NWS9 450 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 P4HTMQ9NXG6 502 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 TEKT2Q9UIF3 430 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 MCM8Q9UJA3 840 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ZNF225Q9UK10 706 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 EIF3LQ9Y262 564 aaKnown RBP7.79□□□□□ -1.16
SF3A1-208ENST00000485618 FIS1Q9Y3D6 152 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 DNAJC15Q9Y5T4 150 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 ZNF780BQ9Y6R6 833 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 SCN3AQ9NY46 2000 aa7.79□□□□□ -1.16
SF3A1-208ENST00000485618 A0A0A6YYD5 115 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 C1orf226A1L170 272 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 NPIPB8E9PQR5 432 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 MKRN2OSH3BPM6 223 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 RTCAO00442 366 aaKnown RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 CYR61O00622 381 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 HDAC3O15379 428 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 PROM1O43490 865 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 CDC123O75794 336 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 SASH3O75995 380 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 TGDSO95455 350 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 HPP00738 406 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 IFNA16P05015 189 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 ANXA4P09525 319 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-208ENST00000485618 LINC00032P0C843 101 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 CHN1P15882 459 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 PRPH2P23942 346 aa7.78□□□□□ -1.16
SF3A1-208ENST00000485618 PIK3R1P27986 724 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms