RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 NECTIN3Q9NQS3 549 aa25.02■■□□□ 1.6
SMDT1-203ENST00000484235 PRTFDC1Q9NRG1 225 aa25.02■■□□□ 1.6
SMDT1-203ENST00000484235 NMRK1Q9NWW6 199 aa25.02■■□□□ 1.6
SMDT1-203ENST00000484235 SLC17A7Q9P2U7 560 aa25.02■■□□□ 1.6
SMDT1-203ENST00000484235 TCRBV16S1A1N1A0A5B0 115 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 BLACEA4D250 179 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 UBFD1O14562 309 aaKnown RBP25.01■■□□□ 1.59
SMDT1-203ENST00000484235 TYROBPO43914 113 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 CTNSO60931 367 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 ULK1O75385 1050 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 SLC13A2Q13183 592 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 PLAG1Q6DJT9 500 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 JMJD6Q6NYC1 403 aaPredicted RBP25.01■■□□□ 1.59
SMDT1-203ENST00000484235 SCUBE1Q8IWY4 988 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 TMEM52Q8NDY8 209 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 AGAP11Q8TF27 550 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 PGM2Q96G03 612 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 CSF3RQ99062 836 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 LPAR4Q99677 370 aa25.01■■□□□ 1.59
SMDT1-203ENST00000484235 EEDO75530 441 aaKnown RBP25■■□□□ 1.59
SMDT1-203ENST00000484235 HSD3B1P14060 373 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 HSD3B2P26439 372 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 HMOX2P30519 316 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 HNRNPFP52597 415 aaKnown RBP25■■□□□ 1.59
SMDT1-203ENST00000484235 ZNF33BQ06732 778 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 KLRB1Q12918 225 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 EXT1Q16394 746 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 TNFAIP8L3Q5GJ75 292 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 PAPD4Q6PIY7 484 aaKnown RBP25■■□□□ 1.59
SMDT1-203ENST00000484235 GPR180Q86V85 440 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 EXOC3L1Q86VI1 746 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 NUDT13Q86X67 352 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 TEX19Q8NA77 164 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 SSU72Q9NP77 194 aaKnown RBP25■■□□□ 1.59
SMDT1-203ENST00000484235 PHF11Q9UIL8 331 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 FBXW2Q9UKT8 454 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 SLC12A4Q9UP95 1085 aa25■■□□□ 1.59
SMDT1-203ENST00000484235 A0A0A6YYD5 115 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 SYNDIG1LA6NDD5 238 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 CTIFO43310 598 aaKnown RBP24.99■■□□□ 1.59
SMDT1-203ENST00000484235 DPM1O60762 260 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 CPN2P22792 545 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 NUP210LQ5VU65 1888 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 CYP20A1Q6UW02 462 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 IGFL3Q6UXB1 125 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 CNDP1Q96KN2 507 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 GATA5Q9BWX5 397 aaPredicted RBP24.99■■□□□ 1.59
SMDT1-203ENST00000484235 RRAGDQ9NQL2 400 aaPredicted RBP24.99■■□□□ 1.59
SMDT1-203ENST00000484235 LYARQ9NX58 379 aaKnown RBP24.99■■□□□ 1.59
SMDT1-203ENST00000484235 ADAM29Q9UKF5 820 aa24.99■■□□□ 1.59
SMDT1-203ENST00000484235 FAM58BPP0C7Q3 252 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 ALDH3A1P30838 453 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 TLX1P31314 330 aaPredicted RBP24.98■■□□□ 1.59
SMDT1-203ENST00000484235 CSTF3Q12996 717 aaKnown RBP24.98■■□□□ 1.59
SMDT1-203ENST00000484235 BTBD16Q32M84 506 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 TCHHL1Q5QJ38 904 aaPredicted RBP24.98■■□□□ 1.59
SMDT1-203ENST00000484235 MRM1Q6IN84 353 aaKnown RBP24.98■■□□□ 1.59
SMDT1-203ENST00000484235 PAGE2Q7Z2X7 111 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 PRICKLE2Q7Z3G6 844 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 METTL4Q8N3J2 472 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 GBP7Q8N8V2 638 aaPredicted RBP24.98■■□□□ 1.59
SMDT1-203ENST00000484235 M1APQ8TC57 530 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 PSMF1Q92530 271 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 TM9SF4Q92544 642 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 TRMOQ9BU70 441 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 MRPL1Q9BYD6 325 aaKnown RBP24.98■■□□□ 1.59
SMDT1-203ENST00000484235 VPS29Q9UBQ0 182 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 ANAPC2Q9UJX6 822 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 ATG4BQ9Y4P1 393 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 ASB4Q9Y574 426 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 TIMM22Q9Y584 194 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 CLDN16Q9Y5I7 305 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 HEMK1Q9Y5R4 338 aaPredicted RBP24.98■■□□□ 1.59
SMDT1-203ENST00000484235 ACTL7BQ9Y614 415 aa24.98■■□□□ 1.59
SMDT1-203ENST00000484235 PROM1O43490 865 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 CELA2AP08217 269 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 MYZAPP0CAP1 466 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 CRB2Q5IJ48 1285 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 EFCAB3Q8N7B9 438 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 C7orf57Q8NEG2 295 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 BRIX1Q8TDN6 353 aaKnown RBP24.97■■□□□ 1.59
SMDT1-203ENST00000484235 SREK1Q8WXA9 508 aaKnown RBP24.97■■□□□ 1.59
SMDT1-203ENST00000484235 KCNA7Q96RP8 456 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 LMF1Q96S06 567 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 MMP25Q9NPA2 562 aa24.97■■□□□ 1.59
SMDT1-203ENST00000484235 UBR5O95071 2799 aaPredicted RBP24.96■■□□□ 1.59
SMDT1-203ENST00000484235 SERTM1A2A2V5 107 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 SUV39H1O43463 412 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 TMPRSS11DO60235 418 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 KLK1P06870 262 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 ITGAMP11215 1152 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 BUD31P41223 144 aaPredicted RBP24.96■■□□□ 1.59
SMDT1-203ENST00000484235 HNRNPH2P55795 449 aaKnown RBP24.96■■□□□ 1.59
SMDT1-203ENST00000484235 TBL3Q12788 808 aaKnown RBP24.96■■□□□ 1.59
SMDT1-203ENST00000484235 STX4Q12846 297 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 IGFL2Q6UWQ7 119 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 ISLR2Q6UXK2 745 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 CLNKQ7Z7G1 428 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 TANKQ92844 425 aa24.96■■□□□ 1.59
SMDT1-203ENST00000484235 ZBTB9Q96C00 473 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms