RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 TMEM216Q9P0N5 145 aa9.39□□□□□ -0.91
CPSF4-213ENST00000484112 ABI3Q9P2A4 366 aa9.39□□□□□ -0.91
CPSF4-213ENST00000484112 IGHV1-45A0A0A0MS14 117 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 CCDC151A5D8V7 595 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 A8MT66 165 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 A8MUI8 341 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 FAM227AF5H4B4 570 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 C19orf84I3L1E1 186 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 COPEO14579 308 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 ERI3O43414 337 aaKnown RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 B3GALT2O43825 422 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 SLC19A2O60779 497 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 PRAMEF2O60811 474 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 SCELO95171 688 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 SIX3O95343 332 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 MLYCDO95822 493 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 FHP07954 510 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 C8orf89P0DMQ9 161 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 ITGAMP11215 1152 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 RNH1P13489 461 aaKnown RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 KRT4P19013 534 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 PTX3P26022 381 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 SLCO1A2P46721 670 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 CCNG1P51959 295 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 SMSP52788 366 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 PRKAA2P54646 552 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 MTTPP55157 894 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 KRTAP10-9P60411 292 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 ADORA2A-AS1P86434 159 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 CUL3Q13618 768 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 C3AR1Q16581 482 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 FBXO48Q5FWF7 155 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 TOR1AIP1Q5JTV8 583 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF678Q5SXM1 525 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 ABHD17BQ5VST6 288 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 ABHD17CQ6PCB6 329 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 QSOX2Q6ZRP7 698 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 RIPOR1Q6ZS17 1223 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 VN1R5Q7Z5H4 357 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 EPS8L3Q8TE67 593 aaKnown RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF483Q8TF39 744 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 CCT6BQ92526 530 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 PKNOX2Q96KN3 472 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 MACROD1Q9BQ69 325 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 TUBB6Q9BUF5 446 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 MS4A8Q9BY19 250 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 NOL11Q9H8H0 719 aaKnown RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 COPS7BQ9H9Q2 264 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 RIC8BQ9NVN3 520 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 TINAGQ9UJW2 476 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 MKL2Q9ULH7 1088 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 MRPS33Q9Y291 106 aaKnown RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 MMACHCQ9Y4U1 282 aa9.38□□□□□ -0.91
CPSF4-213ENST00000484112 V9GYY5 206 aaPredicted RBP9.38□□□□□ -0.91
CPSF4-213ENST00000484112 PRRC2CQ9Y520 2896 aaKnown RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 A0A1W2PPM1 405 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 OR5H15A6NDH6 313 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 MAGEB17A8MXT2 336 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 GOLGA8RI6L899 631 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 PSMD12O00232 456 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 CDK2AP1O14519 115 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 OR7A17O14581 309 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 CHST10O43529 356 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 DLX3O60479 287 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 RDH16O75452 317 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 SEMA3DO95025 777 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 TBX6O95947 436 aaPredicted RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 MYL2P10916 166 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 SSTR2P30874 369 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 HNRNPH1P31943 449 aaKnown RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 ST13P50502 369 aaKnown RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 PKNOX1P55347 436 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 HSD17B7P56937 341 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 DNAJB13P59910 316 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 RAB8AP61006 207 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 MAT1AQ00266 395 aaKnown RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 CLCQ05315 142 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 ASPHQ12797 758 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 BIKQ13323 160 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 CDSNQ15517 529 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 SYT16Q17RD7 645 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 DEPDC1Q5TB30 811 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 KHDRBS2Q5VWX1 349 aaKnown RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 ZYG11AQ6WRX3 759 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 PRSS41Q7RTY9 318 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 MILR1Q7Z6M3 343 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 TRABD2AQ86V40 505 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 HUS1BQ8NHY5 278 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 WDR20Q8TBZ3 569 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 RGMAQ96B86 450 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 MTFMTQ96DP5 389 aaKnown RBP9.37□□□□□ -0.91
CPSF4-213ENST00000484112 APOPT1Q96IL0 206 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 MAGED4Q96JG8 741 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 QRFPRQ96P65 431 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 ZNF382Q96SR6 550 aa9.37□□□□□ -0.91
CPSF4-213ENST00000484112 SERPINI1Q99574 410 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms