RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 CHST11Q9NPF2 352 aa18.49■□□□□ 0.55
HPS4-213ENST00000483631 ASB1Q9Y576 335 aa18.49■□□□□ 0.55
HPS4-213ENST00000483631 CLCA3PQ9Y6N3 262 aa18.49■□□□□ 0.55
HPS4-213ENST00000483631 UGDHO60701 494 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 WISP2O76076 250 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 ESRRAP11474 423 aaPredicted RBP18.48■□□□□ 0.55
HPS4-213ENST00000483631 MTHFD2P13995 350 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 HIST1H1TP22492 207 aaPredicted RBP18.48■□□□□ 0.55
HPS4-213ENST00000483631 PIK3CBP42338 1070 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 ST13P50502 369 aaKnown RBP18.48■□□□□ 0.55
HPS4-213ENST00000483631 SSR4P51571 173 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 SMSP52788 366 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 SRSF11Q05519 484 aaKnown RBP18.48■□□□□ 0.55
HPS4-213ENST00000483631 STX4Q12846 297 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 ACAP2Q15057 778 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 AP5B1Q2VPB7 878 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 C8orf74Q6P047 294 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 UBE3DQ7Z6J8 389 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 RELL1Q8IUW5 271 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 CENPLQ8N0S6 344 aaPredicted RBP18.48■□□□□ 0.55
HPS4-213ENST00000483631 CPSF7Q8N684 471 aaKnown RBP18.48■□□□□ 0.55
HPS4-213ENST00000483631 ACOT4Q8N9L9 421 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 OR7G3Q8NG95 312 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 C16orf52Q8NHV5 167 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 TIMMDC1Q9NPL8 285 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 ZDHHC18Q9NUE0 388 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 RYDENQ9NUL5 291 aaKnown RBP18.48■□□□□ 0.55
HPS4-213ENST00000483631 MS4A12Q9NXJ0 267 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 ABCA12Q86UK0 2595 aa18.48■□□□□ 0.55
HPS4-213ENST00000483631 UBXN8O00124 270 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 KLK8O60259 260 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 C2P06681 752 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 PPP2R1BP30154 601 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 PHBP35232 272 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 SETDB1Q15047 1291 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 ZNF630Q2M218 657 aaPredicted RBP18.47■□□□□ 0.55
HPS4-213ENST00000483631 DEPDC1Q5TB30 811 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 KHDRBS2Q5VWX1 349 aaKnown RBP18.47■□□□□ 0.55
HPS4-213ENST00000483631 LIPJQ5W064 366 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 HSDL2Q6YN16 418 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 ZNF793Q6ZN11 406 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 ZFP62Q8NB50 900 aaPredicted RBP18.47■□□□□ 0.55
HPS4-213ENST00000483631 PHF10Q8WUB8 498 aaKnown RBP18.47■□□□□ 0.55
HPS4-213ENST00000483631 MARVELD3Q96A59 401 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 NXNL1Q96CM4 212 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 CENPKQ9BS16 269 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 ALOXE3Q9BYJ1 711 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 TSPYL1Q9H0U9 437 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 MYOTQ9UBF9 498 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 TINAGQ9UJW2 476 aa18.47■□□□□ 0.55
HPS4-213ENST00000483631 TMEM200CA6NKL6 621 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 KLHL2O95198 593 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 IFNA16P05015 189 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 ABOP16442 354 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 MEOX1P50221 254 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 ALDH18A1P54886 795 aaKnown RBP18.46■□□□□ 0.55
HPS4-213ENST00000483631 BMPR2Q13873 1038 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 RNFT1Q5M7Z0 435 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 KLC3Q6P597 504 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 CLNKQ7Z7G1 428 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 SULF2Q8IWU5 870 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 CHERPQ8IWX8 916 aaKnown RBP18.46■□□□□ 0.55
HPS4-213ENST00000483631 C17orf53Q8N3J3 647 aaPredicted RBP18.46■□□□□ 0.55
HPS4-213ENST00000483631 PTPMT1Q8WUK0 201 aaPredicted RBP18.46■□□□□ 0.55
HPS4-213ENST00000483631 MAPKAP1Q9BPZ7 522 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 FUT8Q9BYC5 575 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 TSPAN10Q9H1Z9 355 aaPredicted RBP18.46■□□□□ 0.55
HPS4-213ENST00000483631 PSD3Q9NYI0 1048 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 SH3BGRL2Q9UJC5 107 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 MEMO1Q9Y316 297 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 PCDHGA11Q9Y5H2 935 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 TNPO3Q9Y5L0 923 aaKnown RBP18.46■□□□□ 0.55
HPS4-213ENST00000483631 DNAJC13O75165 2243 aa18.46■□□□□ 0.55
HPS4-213ENST00000483631 HMX2A2RU54 273 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 A8MVJ9 347 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 PRRG2O14669 202 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 PEX1O43933 1283 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 TUBB4AP04350 444 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 PCNAP12004 261 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 GMPRP36959 345 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 SSR2P43308 183 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 PIK3CGP48736 1102 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 IGLV3-21P80748 117 aaPredicted RBP18.45■□□□□ 0.54
HPS4-213ENST00000483631 ADORA2A-AS1P86434 159 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 PCBP2Q15366 365 aaKnown RBP eCLIP18.45■□□□□ 0.54
HPS4-213ENST00000483631 MROH9Q5TGP6 573 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 ZCCHC7Q8N3Z6 543 aaKnown RBP18.45■□□□□ 0.54
HPS4-213ENST00000483631 OR5L2Q8NGL0 311 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 KCTD4Q8WVF5 259 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 RGMAQ96B86 450 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 REPS1Q96D71 796 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 ACSS3Q9H6R3 686 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 SNX15Q9NRS6 342 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 HPF1Q9NWY4 346 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 MTRF1LQ9UGC7 380 aaKnown RBP18.45■□□□□ 0.54
HPS4-213ENST00000483631 ANGPTL3Q9Y5C1 460 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 ZNF407Q9C0G0 2248 aa18.45■□□□□ 0.54
HPS4-213ENST00000483631 ESYT3A0FGR9 886 aa18.44■□□□□ 0.54
HPS4-213ENST00000483631 E9PLN8 166 aa18.44■□□□□ 0.54
HPS4-213ENST00000483631 H0YIV9 168 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms