RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SCARB2Q14108 478 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 KIR2DS5Q14953 304 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 SKIV2LQ15477 1246 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 LEXMQ3ZCV2 418 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 LIN52Q52LA3 116 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 CRB2Q5IJ48 1285 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 TRIM48Q8IWZ4 208 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ZFP28Q8NHY6 868 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 HLA-CQ95604 372 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 EXOSC8Q96B26 276 aaKnown RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 RMND5BQ96G75 393 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-225ENST00000483495 FBXL20Q96IG2 436 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 MACROD1Q9BQ69 325 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 CAAP1Q9H8G2 361 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 VNN3Q9NY84 501 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 C5AR2Q9P296 337 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 CPNE7Q9UBL6 633 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 CA14Q9ULX7 337 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 PADI2Q9Y2J8 665 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 ENTPD2Q9Y5L3 495 aa12.57□□□□□ -0.4
CPNE1-225ENST00000483495 MAP3K13O43283 966 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 FKBP9O95302 570 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 CLPTM1O96005 669 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 VIPP01282 170 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 PABPC4LP0CB38 370 aaKnown RBP12.56□□□□□ -0.4
CPNE1-225ENST00000483495 UGT2B7P16662 529 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 RPL5P46777 297 aaKnown RBP12.56□□□□□ -0.4
CPNE1-225ENST00000483495 CDK6Q00534 326 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 TGM3Q08188 693 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 PLCL1Q15111 1095 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 KCTD21Q4G0X4 260 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 FAM180BQ6P0A1 224 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 FBXO42Q6P3S6 717 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 SPESP1Q6UW49 350 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 ISLR2Q6UXK2 745 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 HS3ST5Q8IZT8 346 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 OR8K5Q8NH50 307 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 NFKBIDQ8NI38 313 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 GAL3ST3Q96A11 431 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 TM4SF19Q96DZ7 209 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 NRBF2Q96F24 287 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 TMEM121BQ9BXQ6 578 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-225ENST00000483495 EPB41L1Q9H4G0 881 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 SMURF2Q9HAU4 748 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 SLC35C2Q9NQQ7 365 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 ZSCAN32Q9NX65 697 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 ACTR10Q9NZ32 417 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 MRPS17Q9Y2R5 130 aaKnown RBP12.56□□□□□ -0.4
CPNE1-225ENST00000483495 SNX8Q9Y5X2 465 aa12.56□□□□□ -0.4
CPNE1-225ENST00000483495 MYOCOSA0A1B0GUC4 107 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 A0A1W2PR48 441 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 E2F6O75461 281 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 STATHP02808 62 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 AQP1P29972 269 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 RXRGP48443 463 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 CASP9P55211 416 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 ITGA1P56199 1179 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 DSTNP60981 165 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 ASPGQ86U10 573 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 FRMD1Q8N878 549 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 UCN3Q969E3 161 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 THAP11Q96EK4 314 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 OR2A5Q96R48 311 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 CLK4Q9HAZ1 481 aaKnown RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 LTB4R2Q9NPC1 389 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 A4GALTQ9NPC4 353 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 PILRAQ9UKJ1 303 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 ATG4BQ9Y4P1 393 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 A0A1B0GTW7 788 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 OR6C74A6NCV1 312 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 hCG_2039718K7EN88 272 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 SOX1O00570 391 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 B4GALT2O60909 372 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 PGM3O95394 542 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 CELA2BP08218 269 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 POLR2CP19387 275 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 MAGP20916 626 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 FPR1P21462 350 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 DNAJA1P31689 397 aaKnown RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 CDK9P50750 372 aaKnown RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 BLKP51451 505 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 STARD6P59095 220 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 RGS1Q08116 209 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 RFX4Q33E94 735 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 ZC3H12BQ5HYM0 836 aaKnown RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 TTC23Q5W5X9 447 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 FCRL6Q6DN72 434 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 PTCRAQ6ISU1 281 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 C6orf120Q7Z4R8 191 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 PARGQ86W56 976 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 DCP2Q8IU60 420 aaKnown RBP12.55□□□□□ -0.4
CPNE1-225ENST00000483495 TSPAN14Q8NG11 270 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 PATE1Q8WXA2 126 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 TAMM41Q96BW9 452 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 KLHDC7BQ96G42 594 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 TPD52L3Q96J77 140 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 AMDHD1Q96NU7 426 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 MBOAT4Q96T53 435 aa12.55□□□□□ -0.4
CPNE1-225ENST00000483495 TOR3AQ9H497 397 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms