RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ADIPOR2Q86V24 386 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 TMEM25Q86YD3 366 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CLDN19Q8N6F1 224 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 TMIEQ8NEW7 156 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 OR1N1Q8NGS0 311 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 OR2I1PQ8NGU4 316 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 OR2T11Q8NH01 316 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CANT1Q8WVQ1 401 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 VPS33AQ96AX1 596 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 TMEM159Q96B96 161 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 SLCO4A1Q96BD0 722 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 TESCQ96BS2 214 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 REPS1Q96D71 796 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 DGCR14Q96DF8 476 aaKnown RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 ZNF764Q96H86 408 aaPredicted RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 PPP1R16AQ96I34 528 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ITCHQ96J02 903 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 RPL10LQ96L21 214 aaKnown RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 SMIM14Q96QK8 99 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 VRK1Q99986 396 aaPredicted RBP7.4□□□□□ -1.22
SNX13-208ENST00000482558 TMEM79Q9BSE2 394 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ANKRD60Q9BZ19 345 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 DPH1Q9BZG8 443 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CLMPQ9H6B4 373 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 MAGIXQ9H6Y5 334 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 COQ10BQ9H8M1 238 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 IL1RL2Q9HB29 575 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 ELOVL2Q9NXB9 296 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 KLQ9UEF7 1012 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 PACSIN3Q9UKS6 424 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 SUFUQ9UMX1 484 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 PDE10AQ9Y233 779 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 MYRFQ9Y2G1 1151 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 CCL27Q9Y4X3 112 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 PRSS21Q9Y6M0 314 aa7.4□□□□□ -1.22
SNX13-208ENST00000482558 A0A096LPI6 279 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 RNF103-CHMP3A0A140T963 221 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 A0A1B0GTL3 188 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 C16orf96A6NNT2 1141 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 ZNF839A8K0R7 811 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 LOC730098B7Z3J9 87 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 H0YAE9 185 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 TAF4O00268 1085 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 INPP4BO15327 924 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PSIP1O75475 530 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 RASAL1O95294 804 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 NFATC1O95644 943 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 HPRP00739 348 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 RETP07949 1114 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 ANXA6P08133 673 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 CCDC159P0C7I6 412 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 FTH1P19P0C7X4 201 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 RAP2AP10114 183 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PNLIPP16233 465 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 DDX5P17844 614 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 ITGB6P18564 788 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 GGT1P19440 569 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PRPS1L1P21108 318 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 ATP6V1B2P21281 511 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 LHCGRP22888 699 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PPIBP23284 216 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 CCR7P32248 378 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 TTKP33981 857 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PSMB10P40306 273 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 ASMTP46597 345 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 SLC6A11P48066 632 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 TRPC1P48995 793 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 STK19P49842 368 aaPredicted RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 CCT8P50990 548 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 RPL38P63173 70 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 SRSF3P84103 164 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 CHRNB3Q05901 458 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 DYNC1I2Q13409 638 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 TMED1Q13445 227 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PHKG1Q16816 387 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 KCTD21Q4G0X4 260 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 SYTL3Q4VX76 610 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PAGE3Q5JUK9 113 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 LY6G5CQ5SRR4 150 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 HENMT1Q5T8I9 393 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 DEPDC1Q5TB30 811 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 PRAMEF9Q5VWM5 478 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 STEAP3Q658P3 488 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 GLYATQ6IB77 296 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 SLC30A9Q6PML9 568 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 DLEU7Q6UYE1 221 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 OTOP2Q7RTS6 562 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 SPRED1Q7Z699 444 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 DSG4Q86SJ6 1040 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 TSPAN33Q86UF1 283 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 CARM1Q86X55 608 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 RASGRP3Q8IV61 690 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 CHERPQ8IWX8 916 aaKnown RBP7.39□□□□□ -1.23
SNX13-208ENST00000482558 ADGRG5Q8IZF4 528 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 EID3Q8N140 333 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 TMEM132CQ8N3T6 1108 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 SVOPLQ8N434 492 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 GALNT4Q8N4A0 578 aa7.39□□□□□ -1.23
SNX13-208ENST00000482558 SNX31Q8N9S9 440 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms