RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ARRB1P49407 418 aaPredicted RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 CASP4P49662 377 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 P2RX3P56373 397 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GSDMDP57764 484 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 CSNK2A1P68400 391 aaPredicted RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 PPP2R2BQ00005 443 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 PMS2P3Q13401 168 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 ART3Q13508 389 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 VEZF1Q14119 521 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GCKRQ14397 625 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 KPNB1Q14974 876 aaKnown RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 UGT3A2Q3SY77 523 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 XKR4Q5GH76 650 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 LRRC73Q5JTD7 316 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.88□□□□□ -1.79
VPS41-212ENST00000482217 RAET1LQ5VY80 246 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 TMIGD1Q6UXZ0 262 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 QSOX2Q6ZRP7 698 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 TMEM126BQ8IUX1 230 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 ADGRF3Q8IZF5 1079 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 C1orf87Q8N0U7 546 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GCNT2Q8N0V5 402 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 FAM58AQ8N1B3 248 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GTPBP8Q8N3Z3 284 aaPredicted RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 SLC25A41Q8N5S1 370 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 CSNK2A3Q8NEV1 391 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GPRC5AQ8NFJ5 357 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 OR10H4Q8NGA5 316 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 OR14L1PQ8NHC6 308 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 KCNG3Q8TAE7 436 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 FANK1Q8TC84 345 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 SEPT8Q92599 483 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 LPAR1Q92633 364 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 DUS3LQ96G46 650 aaKnown RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 TSNARE1Q96NA8 513 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GPR78Q96P69 363 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 DUX5Q96PT3 197 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 CPNE1Q99829 537 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 MXRA8Q9BRK3 442 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GATA5Q9BWX5 397 aaPredicted RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 TEKT3Q9BXF9 490 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 IDI2Q9BXS1 227 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 LRMDAQ9H2I8 198 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 FN3KQ9H479 309 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 EQTNQ9NQ60 294 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 PDGFCQ9NRA1 345 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.88□□□□□ -1.79
VPS41-212ENST00000482217 NLKQ9UBE8 527 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 SEC14L3Q9UDX4 400 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 CHMP2BQ9UQN3 213 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 NFE2L3Q9Y4A8 694 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 RNF115Q9Y4L5 304 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 DCAF1Q9Y4B6 1507 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 ANKRD30AQ9BXX3 1397 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 FAM240BA0A1B0GVZ2 78 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PLSCR5A0PG75 271 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 MBLAC1A4D2B0 266 aaPredicted RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 METTL21EPA6NDL7 271 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 LRRC3CA6NJW4 275 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ANKRD30BLA7E2S9 258 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SLCO1B7G3V0H7 640 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 BCKDKO14874 412 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SEC14L5O43304 696 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 HCN1O60741 890 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PRAF2O60831 178 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 MOSPD3O75425 235 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 DFFBO76075 338 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PROS1P07225 676 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ALDOCP09972 364 aaKnown RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 NHLRC4P0CG21 123 aaPredicted RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 AKR1A1P14550 325 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 EZRP15311 586 aaKnown RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 NCK1P16333 377 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 POLR2CP19387 275 aaPredicted RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 TNNI3P19429 210 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 CD22P20273 847 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PSMB6P28072 239 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PRDX2P32119 198 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 GJC1P36383 396 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SPAM1P38567 509 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PTGFRP43088 359 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 NDST2P52849 883 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 CLDN2P57739 230 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PPIAP62937 165 aaKnown RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 PLOD1Q02809 727 aaPredicted RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 TFF2Q03403 129 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ZFP36L1Q07352 338 aaKnown RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 SLC10A2Q12908 348 aaPredicted RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 GRIK3Q13003 919 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 PEX6Q13608 980 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ALKBH1Q13686 389 aaKnown RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 CAMK4Q16566 473 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ME3Q16798 604 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 TMEM44Q2T9K0 475 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 ANXA2RQ3ZCQ2 193 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 GXYLT1Q4G148 440 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 SOWAHCQ53LP3 525 aaPredicted RBP3.87□□□□□ -1.79
VPS41-212ENST00000482217 AWAT1Q58HT5 328 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 TTMPQ5BVD1 217 aa3.87□□□□□ -1.79
VPS41-212ENST00000482217 XKR7Q5GH72 579 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms