RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 DHRS13Q6UX07 377 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 MSANTD1Q6ZTZ1 278 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 BPHLQ86WA6 291 aaPredicted RBP16.61■□□□□ 0.25
UPF3A-206ENST00000480362 DSELQ8IZU8 1212 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 SHISA5Q8N114 240 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 METTL27Q8N6F8 245 aaPredicted RBP16.61■□□□□ 0.25
UPF3A-206ENST00000480362 STRADBQ9C0K7 418 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 C1orf21Q9H246 121 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 RMND5AQ9H871 391 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 WDR41Q9HAD4 459 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 CLK4Q9HAZ1 481 aaKnown RBP16.61■□□□□ 0.25
UPF3A-206ENST00000480362 APMAPQ9HDC9 416 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 AKAP7Q9P0M2 348 aaPredicted RBP16.61■□□□□ 0.25
UPF3A-206ENST00000480362 C5AR2Q9P296 337 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 DHCR7Q9UBM7 475 aaKnown RBP16.61■□□□□ 0.25
UPF3A-206ENST00000480362 CLCA2Q9UQC9 943 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 SPACA6W5XKT8 324 aa16.61■□□□□ 0.25
UPF3A-206ENST00000480362 SCN2BO60939 215 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 NR2F6P10588 404 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CDK4P11802 303 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 FGF5P12034 268 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 DDX5P17844 614 aaKnown RBP16.6■□□□□ 0.25
UPF3A-206ENST00000480362 TLX1P31314 330 aaPredicted RBP16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CPOXP36551 454 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 RAB38P57729 211 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 MC2RQ01718 297 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 TNFRSF17Q02223 184 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 NFYCQ13952 458 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 IL11RAQ14626 422 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 ISXQ2M1V0 245 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 MPEG1Q2M385 716 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 ANXA8L1Q5VT79 327 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CYB5D1Q6P9G0 228 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 ANKRD46Q86W74 232 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 PPP1R3BQ86XI6 285 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 TMEM126BQ8IUX1 230 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 KIAA2013Q8IYS2 634 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 DPP10Q8N608 796 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 BMPERQ8N8U9 685 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 FAM47BQ8NA70 645 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 GTF2H4Q92759 462 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CIDECQ96AQ7 238 aaPredicted RBP16.6■□□□□ 0.25
UPF3A-206ENST00000480362 ROPN1LQ96C74 230 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 KLHL29Q96CT2 875 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 MVB12AQ96EY5 273 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CSF3RQ99062 836 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CMKLR1Q99788 373 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CTRCQ99895 268 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 SLC7A5P2Q9GIP4 190 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 IL1RL2Q9HB29 575 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 GID8Q9NWU2 228 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 FAM120CQ9NX05 1096 aaKnown RBP16.6■□□□□ 0.25
UPF3A-206ENST00000480362 TAS2R7Q9NYW3 318 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 EHD3Q9NZN3 535 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 HCN3Q9P1Z3 774 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CES1P1Q9UKY3 287 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 CDC14AQ9UNH5 594 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 SRPK3Q9UPE1 567 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 TMEM184BQ9Y519 407 aaPredicted RBP16.6■□□□□ 0.25
UPF3A-206ENST00000480362 MAU2Q9Y6X3 613 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 MYO15AQ9UKN7 3530 aa16.6■□□□□ 0.25
UPF3A-206ENST00000480362 PRSS51A0A1B0GVH4 220 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 SPAARA0A1B0GVQ0 90 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 ANKRD65E5RJM6 399 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 FAM227AF5H4B4 570 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 CSO75390 466 aaKnown RBP16.59■□□□□ 0.25
UPF3A-206ENST00000480362 SCRG1O75711 98 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 TIAF1O95411 115 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 EFNA1P20827 205 aaPredicted RBP16.59■□□□□ 0.25
UPF3A-206ENST00000480362 CSRP1P21291 193 aaKnown RBP16.59■□□□□ 0.25
UPF3A-206ENST00000480362 SHC2P98077 582 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 MAT1AQ00266 395 aaKnown RBP16.59■□□□□ 0.25
UPF3A-206ENST00000480362 C6orf10Q5SRN2 563 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 PWWP2BQ6NUJ5 590 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 FAM180BQ6P0A1 224 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 SLC48A1Q6P1K1 146 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 C16orf89Q6UX73 402 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 HACD2Q6Y1H2 254 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 ASRGL1Q7L266 308 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 KIF2BQ8N4N8 673 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 NATD1Q8N6N6 113 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 VPS37AQ8NEZ2 397 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 NETO1Q8TDF5 533 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 EXOSC8Q96B26 276 aaKnown RBP16.59■□□□□ 0.25
UPF3A-206ENST00000480362 RNF31Q96EP0 1072 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 ZNF764Q96H86 408 aaPredicted RBP16.59■□□□□ 0.25
UPF3A-206ENST00000480362 ITCHQ96J02 903 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 INPP5KQ9BT40 448 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 LRMDAQ9H2I8 198 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 RPF2Q9H7B2 306 aaKnown RBP16.59■□□□□ 0.25
UPF3A-206ENST00000480362 ACTR5Q9H9F9 607 aaPredicted RBP16.59■□□□□ 0.25
UPF3A-206ENST00000480362 SERHLQ9NQF3 203 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 FBXO8Q9NRD0 319 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 SLAMF8Q9P0V8 285 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 CROTQ9UKG9 612 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 UTS2RQ9UKP6 389 aa16.59■□□□□ 0.25
UPF3A-206ENST00000480362 SPTBP11277 2137 aa16.58■□□□□ 0.25
UPF3A-206ENST00000480362 A0A1B0GX78 115 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 B4E171 279 aa16.58■□□□□ 0.24
UPF3A-206ENST00000480362 RNASET2O00584 256 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms