RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TRIM46Q7Z4K8 759 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 CPEB2Q7Z5Q1 589 aaKnown RBP10.18□□□□□ -0.78
ATG4B-219ENST00000479941 ANKRD37Q7Z713 158 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 SCUBE1Q8IWY4 988 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 GALNT16Q8N428 558 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 EFCAB3Q8N7B9 438 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 FAM47BQ8NA70 645 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 CSF3RQ99062 836 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 PAIP2Q9BPZ3 127 aaKnown RBP10.18□□□□□ -0.78
ATG4B-219ENST00000479941 TUBB6Q9BUF5 446 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 TRIM55Q9BYV6 548 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 ACPTQ9BZG2 426 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 ZNF700Q9H0M5 742 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 ACBD3Q9H3P7 528 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 TNFRSF12AQ9NP84 129 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 PRTFDC1Q9NRG1 225 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 FBXL4Q9UKA2 621 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 FBXW2Q9UKT8 454 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 G3BP2Q9UN86 482 aaKnown RBP10.18□□□□□ -0.78
ATG4B-219ENST00000479941 TRAF6Q9Y4K3 522 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 CFAP46Q8IYW2 2715 aa10.18□□□□□ -0.78
ATG4B-219ENST00000479941 IGKV3D-11A0A0A0MRZ8 115 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TCRBV16S1A1N1A0A5B0 115 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 HMGB1P1B2RPK0 211 aaPredicted RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 ATXN7O15265 892 aaPredicted RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 PROM1O43490 865 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TMPRSS11DO60235 418 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 KLHL41O60662 606 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 GUCY1B2O75343 617 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 CEACAM4O75871 244 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 DNAJB5O75953 348 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 SASH3O75995 380 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 HSPA4LO95757 839 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 KLK1P06870 262 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 ICAM2P13598 275 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 MAOAP21397 527 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TPP2P29144 1249 aaPredicted RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 CCL11P51671 97 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 WDR4P57081 412 aaKnown RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 OR4D2P58180 307 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 ABCE1P61221 599 aaKnown RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TRA2BP62995 288 aaKnown RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 AP2B1P63010 937 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 BTG2P78543 158 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 HMGCS1Q01581 520 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TNFRSF17Q02223 184 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 EEF1A2Q05639 463 aaKnown RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 CHAF1BQ13112 559 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 SLC13A2Q13183 592 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 KCNAB2Q13303 367 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 BIKQ13323 160 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 PCOLCEQ15113 449 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 IMPG1Q17R60 797 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TTMPQ5BVD1 217 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 SH2D4BQ5SQS7 431 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 CCNYL2Q5T2Q4 361 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 FAM219BQ5XKK7 198 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 CLEC6AQ6EIG7 209 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 PCSK4Q6UW60 755 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 LANCL3Q6ZV70 420 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 COMMD6Q7Z4G1 85 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 KIRREL3Q8IZU9 778 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 C1orf52Q8N6N3 182 aaKnown RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TMEM52Q8NDY8 209 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 CHTF18Q8WVB6 975 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TANKQ92844 425 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 TSLPQ969D9 159 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 METTL2AQ96IZ6 378 aaKnown RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 LPAR4Q99677 370 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 MESP1Q9BRJ9 268 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 WDR41Q9HAD4 459 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 ZNF160Q9HCG1 818 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 MLXIPLQ9NP71 852 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 SIRT5Q9NXA8 310 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 MCM8Q9UJA3 840 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 ATG4BQ9Y4P1 393 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 ASB4Q9Y574 426 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 PCDHGA9Q9Y5G4 932 aaKnown RBP10.17□□□□□ -0.78
ATG4B-219ENST00000479941 DNAJC15Q9Y5T4 150 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 NUP210LQ5VU65 1888 aa10.17□□□□□ -0.78
ATG4B-219ENST00000479941 MED13Q9UHV7 2174 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 NPIPB8E9PQR5 432 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 SLC28A1O00337 649 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 RGS14O43566 566 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 RSL1D1O76021 490 aaKnown RBP10.16□□□□□ -0.78
ATG4B-219ENST00000479941 GBAP04062 536 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 FAM87AP0C7U9 286 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 CHN1P15882 459 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 BGNP21810 368 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 PRPH2P23942 346 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 PPP2R1BP30154 601 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 ARRB2P32121 409 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 HNRNPFP52597 415 aaKnown RBP10.16□□□□□ -0.78
ATG4B-219ENST00000479941 MAPK12P53778 367 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 HNRNPH2P55795 449 aaKnown RBP10.16□□□□□ -0.78
ATG4B-219ENST00000479941 ACTN3Q08043 901 aaPredicted RBP10.16□□□□□ -0.78
ATG4B-219ENST00000479941 ACSM2AQ08AH3 577 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 STX4Q12846 297 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 SERTAD2Q14140 314 aa10.16□□□□□ -0.78
ATG4B-219ENST00000479941 UGT3A2Q3SY77 523 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms