RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 TXNRD2Q9NNW7 524 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 TIGARQ9NQ88 270 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PCDHB16Q9NRJ7 776 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SLC22A11Q9NSA0 550 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 ACOXLQ9NUZ1 547 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 INTS10Q9NVR2 710 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 ARL15Q9NXU5 204 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 SMPD3Q9NY59 655 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 IFT80Q9P2H3 777 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 WARS2Q9UGM6 360 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 FBXO40Q9UH90 709 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MAD2L2Q9UI95 211 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 CD207Q9UJ71 328 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 RAB23Q9ULC3 237 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 BAIAP2Q9UQB8 552 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PLLPQ9Y342 182 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 PCDHGB1Q9Y5G3 927 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 KLF2Q9Y5W3 355 aaPredicted RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 CACNG2Q9Y698 323 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 FMN2Q9NZ56 1722 aa3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MARF1Q9Y4F3 1742 aaKnown RBP3.87□□□□□ -1.79
CMSS1-204ENST00000479555 MYH10P35580 1976 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 FAM237BA0A1B0GVD1 139 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 PQLC2LA1A4F0 135 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 HEATR9A2RTY3 570 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 CLDN24A6NM45 220 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 BBIP1A8MTZ0 92 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 C12orf71A8MTZ7 269 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 F8W036 122 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 J3QRK9 145 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 EPHB6O15197 1021 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 CHMP2AO43633 222 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 SYNCRIPO60506 623 aaKnown RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 AVILO75366 819 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 MED24O75448 989 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 GABARAPO95166 117 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 CCNDBP1O95273 360 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 LDOC1O95751 146 aaPredicted RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 TSPAN12O95859 305 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 WNT1P04628 370 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 IFNA4P05014 189 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 S100A8P05109 93 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 PSKH1P11801 424 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 CYP11B1P15538 503 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 PDGFRAP16234 1089 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 RAB4AP20338 218 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 NR2F2P24468 414 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 HLA-DMAP28067 261 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 CASP1P29466 404 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 HNF1BP35680 557 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 OPRL1P41146 370 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 HNF4AP41235 474 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 GARSP41250 739 aaKnown RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 BTDP43251 543 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 ASMTP46597 345 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 GABRB2P47870 512 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 RFX5P48382 616 aaPredicted RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 HCAR3P49019 387 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 PDLIM4P50479 330 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 NUDT2P50583 147 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 TPMTP51580 245 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 PEX3P56589 373 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 EIF3EP60228 445 aaKnown RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 SNRPFP62306 86 aaKnown RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 MRPS22P82650 360 aaKnown RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 RPL36AP83881 106 aaKnown RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 GALK2Q01415 458 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 LRRC74AQ0VAA2 488 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 OVGP1Q12889 678 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 TRAF3Q13114 568 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 PMS2P3Q13401 168 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 GPR68Q15743 365 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 EPC2Q52LR7 807 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 LBHQ53QV2 105 aaPredicted RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 PIGGQ5H8A4 983 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 TEX30Q5JUR7 227 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 C1orf141Q5JVX7 400 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 PRAMEF19Q5SWL8 479 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 ATAD3CQ5T2N8 411 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 LIN9Q5TKA1 542 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 NADSYN1Q6IA69 706 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 HMBOX1Q6NT76 420 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 MTFR2Q6P444 385 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 CYP20A1Q6UW02 462 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 ZYG11AQ6WRX3 759 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 HACD2Q6Y1H2 254 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 TIFABQ6ZNK6 161 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 TMEM26Q6ZUK4 368 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 CYS1Q717R9 158 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 ENOSF1Q7L5Y1 443 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 BNIPLQ7Z465 357 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 MDGA2Q7Z553 956 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 C8orf59Q8N0T1 100 aaPredicted RBP3.86□□□□□ -1.79
CMSS1-204ENST00000479555 SLC25A41Q8N5S1 370 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 ZNF781Q8N8C0 355 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 DNAAF3Q8N9W5 541 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 KIAA0895Q8NCT3 520 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 SETD9Q8NE22 299 aa3.86□□□□□ -1.79
CMSS1-204ENST00000479555 ZNF555Q8NEP9 628 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms