RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 DNAJC27Q9NZQ0 273 aa12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 LSM2Q9Y333 95 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 DNMT3AQ9Y6K1 912 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-208ENST00000479530 IGLV3-16A0A075B6K0 115 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 CCL16O15467 120 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 CSO75390 466 aaKnown RBP12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 GBAP04062 536 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 SCG5P05408 212 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 HBQ1P09105 142 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 CSF3P09919 207 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 ATP1B2P14415 290 aaPredicted RBP12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 IFI44LQ53G44 452 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 ZNF385BQ569K4 471 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 CPTPQ5TA50 214 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 CCDC149Q6ZUS6 474 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 SLC34A3Q8N130 599 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 C1orf52Q8N6N3 182 aaKnown RBP12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 MIXL1Q9H2W2 232 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 SH3BP4Q9P0V3 963 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 FTSJ1Q9UET6 329 aa12.71□□□□□ -0.37
PDZRN3-208ENST00000479530 E7EQ34 232 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 GFYI3L273 518 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 SOX14O95416 240 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 OR56A5P0C7T3 313 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 JUPP14923 745 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 POLR2EP19388 210 aaKnown RBP12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 HTR2BP41595 481 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 P2RX3P56373 397 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 CDC42P60953 191 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 HBA1P69905 142 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 ACSM2AQ08AH3 577 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 TOR1AIP1Q5JTV8 583 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 ACSM2BQ68CK6 577 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 FAAH2Q6GMR7 532 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 ERAP2Q6P179 960 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 FAM131AQ6UXB0 335 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 NPAS3Q8IXF0 933 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 OR4A15Q8NGL6 344 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 OR5AK3PQ8NH89 298 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 C9orf43Q8TAL5 461 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 NACC2Q96BF6 587 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF689Q96CS4 500 aaPredicted RBP12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 VPS35Q96QK1 796 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF556Q9HAH1 456 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 ACOXLQ9NUZ1 547 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 SPG21Q9NZD8 308 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 EXO1Q9UQ84 846 aaKnown RBP12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 PRELID1Q9Y255 219 aa12.71□□□□□ -0.38
PDZRN3-208ENST00000479530 ZAR1LA6NP61 321 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 FADS2P1A8MWK0 482 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 NPIPB8E9PQR5 432 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 YES1P07947 543 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 HIST1H2AGP0C0S8 130 aaPredicted RBP12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 HIST1H2ADP20671 130 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 RORCP51449 518 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 CTSCP53634 463 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 IRF8Q02556 426 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 GLYR1Q49A26 553 aaPredicted RBP12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 LAS2Q8IYD9 372 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 OR2A12Q8NGT7 310 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 WDR20Q8TBZ3 569 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 TMEM203Q969S6 136 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 C11orf24Q96F05 449 aaPredicted RBP12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 HIST1H2AHQ96KK5 128 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 OR4K3Q96R72 315 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 HIST1H2AJQ99878 128 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 H2AFJQ9BTM1 129 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 SLA2Q9H6Q3 261 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 PRM3Q9NNZ6 103 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 DNAJC11Q9NVH1 559 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 CCDC182A6NF36 153 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 OR6C70A6NIJ9 312 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 ARHGEF33A8MVX0 844 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 LILRB3O75022 631 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 RECKO95980 971 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 IDSP22304 550 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 CBLP22681 906 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 MYL9P24844 172 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 MAPK8P45983 427 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC7A9P82251 487 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 EFR3AQ14156 821 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 LARS2Q15031 903 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 DEFB115Q30KQ5 88 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 XKR6Q5GH73 641 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 FRMPD2BQ6IN97 320 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 CAMKK1Q8N5S9 505 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 HCAR2Q8TDS4 363 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 MED8Q96G25 268 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 HS3ST2Q9Y278 367 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 HCN4Q9Y3Q4 1203 aa12.7□□□□□ -0.38
PDZRN3-208ENST00000479530 PLA2G10O15496 165 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 TNFRSF21O75509 655 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CDRT1O95170 752 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 ANXA4P09525 319 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CBSLP0DN79 551 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 ACRP10323 421 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms