RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SPPL2CQ8IUH8 684 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 OR52B6Q8NGF0 335 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 RAB3IL1Q8TBN0 382 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 THAP3Q8WTV1 239 aaPredicted RBP13.66□□□□□ -0.22
USP11-207ENST00000478596 UBE2E3Q969T4 207 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 REPS1Q96D71 796 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 CDK15Q96Q40 435 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 ZNF382Q96SR6 550 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 PLCD4Q9BRC7 762 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 C1QTNF3Q9BXJ4 246 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 TMEM184CQ9NVA4 438 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 ST6GALNAC2Q9UJ37 374 aa13.66□□□□□ -0.22
USP11-207ENST00000478596 NUP210LQ5VU65 1888 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 A0A0J9YVX5 310 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 FEZF1A0PJY2 475 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 FFAR3O14843 346 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
USP11-207ENST00000478596 GPR42O15529 346 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 OR1F1O43749 312 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 PRAMEF2O60811 474 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 OR2B3O76000 313 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 OR4F21O95013 312 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 CHEK2O96017 543 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 SOX11P35716 441 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 MEOX1P50221 254 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 ABCE1P61221 599 aaKnown RBP13.65□□□□□ -0.22
USP11-207ENST00000478596 RPS15AP62244 130 aaKnown RBP13.65□□□□□ -0.22
USP11-207ENST00000478596 YBX1P67809 324 aaKnown RBP13.65□□□□□ -0.22
USP11-207ENST00000478596 REEP5Q00765 189 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 IFT88Q13099 833 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 DOC2AQ14183 400 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 CPSF6Q16630 551 aaKnown RBP eCLIP13.65□□□□□ -0.22
USP11-207ENST00000478596 ZC3H12BQ5HYM0 836 aaKnown RBP13.65□□□□□ -0.22
USP11-207ENST00000478596 SH2D4BQ5SQS7 431 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 GRHL2Q6ISB3 625 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 MED27Q6P2C8 311 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 DMRTC2Q8IXT2 367 aaPredicted RBP13.65□□□□□ -0.22
USP11-207ENST00000478596 CDYL2Q8N8U2 506 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 OR4F6Q8NGB9 312 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 OR11G2Q8NGC1 345 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 FLVCR1-AS1Q8TAF5 88 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 NUDT8Q8WV74 236 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 FKBP10Q96AY3 582 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 VPS50Q96JG6 964 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 C18orf12Q96KH6 178 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 ZFYVE21Q9BQ24 234 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 ELOVL6Q9H5J4 265 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 MANSC1Q9H8J5 431 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 WDR54Q9H977 334 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 NPDC1Q9NQX5 325 aaPredicted RBP13.65□□□□□ -0.22
USP11-207ENST00000478596 SLC22A11Q9NSA0 550 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 PLA2G3Q9NZ20 509 aa13.65□□□□□ -0.22
USP11-207ENST00000478596 OR7A17O14581 309 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 NRP2O60462 931 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 LYPLA1O75608 230 aaPredicted RBP13.64□□□□□ -0.23
USP11-207ENST00000478596 WISP2O76076 250 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 EIF2S1P05198 315 aaKnown RBP13.64□□□□□ -0.23
USP11-207ENST00000478596 ENO1P06733 434 aaKnown RBP13.64□□□□□ -0.23
USP11-207ENST00000478596 HEXAP06865 529 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 CHRNGP07510 517 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 HNF4AP41235 474 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 SLC1A6P48664 564 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 BST1Q10588 318 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 TRAF3Q13114 568 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 DSG2Q14126 1118 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 SGO1Q5FBB7 561 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 ARL13AQ5H913 290 aaPredicted RBP13.64□□□□□ -0.23
USP11-207ENST00000478596 LIPJQ5W064 366 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 SLCO4C1Q6ZQN7 724 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 NCCRP1Q6ZVX7 275 aaPredicted RBP13.64□□□□□ -0.23
USP11-207ENST00000478596 PAQR7Q86WK9 346 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 ZNF655Q8N720 491 aaPredicted RBP13.64□□□□□ -0.23
USP11-207ENST00000478596 AGAP11Q8TF27 550 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 ZUFSPQ96AP4 578 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 SDCCAG3Q96C92 435 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 EHD1Q9H4M9 534 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 ZBTB26Q9HCK0 441 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 TXLNGQ9NUQ3 528 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 DHCR7Q9UBM7 475 aaKnown RBP13.64□□□□□ -0.23
USP11-207ENST00000478596 TRPS1Q9UHF7 1281 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 SNX6Q9UNH7 406 aa13.64□□□□□ -0.23
USP11-207ENST00000478596 RTTNQ86VV8 2226 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 IGKV1-8A0A0C4DH67 115 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 TRBC2A0A5B9 178 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 OR2A25A4D2G3 310 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 ANKDD1BA6NHY2 528 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 E9PLN8 166 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 ZSCAN9O15535 394 aaPredicted RBP13.63□□□□□ -0.23
USP11-207ENST00000478596 UGDHO60701 494 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 KRT6AP02538 564 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 ALBP02768 609 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 STATHP02808 62 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 KRT6BP04259 564 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 SLC35G6P0C7Q6 338 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 EPORP19235 508 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 KRT6CP48668 564 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 VSX2P58304 361 aaPredicted RBP13.63□□□□□ -0.23
USP11-207ENST00000478596 GUCY1A3Q02108 690 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms