RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ELAVL2Q12926 359 aaKnown RBP3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 TMED1Q13445 227 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 C1orf186Q6ZWK4 172 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 MYPOPQ86VE0 399 aaPredicted RBP3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 ANKRD46Q86W74 232 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 ELMOD2Q8IZ81 293 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 SLC22A15Q8IZD6 547 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 Q8NBF4 154 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 AQP11Q8NBQ7 271 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 LPCAT1Q8NF37 534 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 PRSS33Q8NF86 280 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 OR7G3Q8NG95 312 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 OR52E1Q8NGJ3 308 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 OR52K2Q8NGK3 314 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 CCDC110Q8TBZ0 833 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 KIAA1524Q8TCG1 905 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 ATP8B4Q8TF62 1192 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 RAB7BQ96AH8 199 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 SGF29Q96ES7 293 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 CNRIP1Q96F85 164 aaPredicted RBP3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 ATXN7L3BQ96GX2 97 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 PRICKLE1Q96MT3 831 aaPredicted RBP3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 SPATA13Q96N96 652 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 ATOH8Q96SQ7 321 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 LGMNQ99538 433 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 LRRC61Q9BV99 259 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 UBXN6Q9BZV1 441 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 LSG1Q9H089 658 aaKnown RBP3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 DPEP2Q9H4A9 486 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 SYTL2Q9HCH5 934 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 DNAJC11Q9NVH1 559 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 DNAJC17Q9NVM6 304 aaKnown RBP3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 SOHLH2Q9NX45 425 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 TMOD3Q9NYL9 352 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 VPS18Q9P253 973 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 PAK5Q9P286 719 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 NOCTQ9UK39 431 aaKnown RBP3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 MOB4Q9Y3A3 225 aa3.29□□□□□ -1.88
SMARCA1-204ENST00000478420 DHX29Q7Z478 1369 aaKnown RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 A0A0A6YYC8 382 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 IQCMA0A1B0GVH7 501 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ILVBLA1L0T0 632 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 KBTBD13C9JR72 458 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 I3L1I5 382 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 K7EQD1 137 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 CASQ2O14958 399 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 MAGEB2O15479 319 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ST8SIA3O43173 380 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 TSC22D2O75157 780 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 NME6O75414 186 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 PDGFBP01127 241 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 MT-ND2P03891 347 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 TSPY4P0CV99 314 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 TSPY10P0CW01 314 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 DLATP10515 647 aaKnown RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 NCF1P14598 390 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ITIH1P19827 911 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 PIK3R1P27986 724 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 PITPNBP48739 271 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ELP6Q0PNE2 266 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ZNF177Q13360 481 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 GAMTQ14353 236 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 GRB14Q14449 540 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 CCDC40Q4G0X9 1142 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 AARDQ4LEZ3 155 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 BOLA3Q53S33 107 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 KLHL10Q6JEL2 608 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 C16orf87Q6PH81 154 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 TRMT11Q7Z4G4 463 aaKnown RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 C5orf24Q7Z6I8 188 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 GTSCR1Q86UQ5 136 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ZFAND4Q86XD8 727 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 EGFL6Q8IUX8 553 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 UNC5CLQ8IV45 518 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 CLYBLQ8N0X4 340 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 TEX26Q8N6G2 289 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 UXS1Q8NBZ7 420 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 OR10G7Q8NGN6 311 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 RPLP0P6Q8NHW5 317 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 RNASE8Q8TDE3 154 aaKnown RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 UBLCP1Q8WVY7 318 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 CTNNBL1Q8WYA6 563 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ZNF75CPQ92670 426 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 KCNK16Q96T55 309 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 HNRNPABQ99729 332 aaKnown RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 ERP44Q9BS26 406 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 OSBPL8Q9BZF1 889 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 RWDD1Q9H446 243 aaPredicted RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 TUFT1Q9NNX1 390 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 HOXC10Q9NYD6 342 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 NLGN3Q9NZ94 848 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 TMOD2Q9NZR1 351 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 TRPC4Q9UBN4 977 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 BAIAP2L1Q9UHR4 511 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 MUTYHQ9UIF7 546 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 PTBP2Q9UKA9 531 aaKnown RBP3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 STX8Q9UNK0 236 aa3.28□□□□□ -1.88
SMARCA1-204ENST00000478420 PLCL2Q9UPR0 1127 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms